1. Gene
  2. SUPT5H - SPT5 homolog, DSIF elongation factor subunit Gene

SUPT5H - SPT5 homolog, DSIF elongation factor subunit Gene

Homo sapiens

Also known as SPT5; SPT5H; Tat-CT1

Gene ID: 6829 | Gene type: protein coding

About SUPT5H

Cytogenetic location: 19q13.2 Genomic coordinates (GRCh38): 19:39,445,582-39,476,670 (from NCBI)

This gene has 20 transcripts (splice variants) and 202 orthologues. Ubiquitous expression in testis (RPKM 64.5), bone marrow (RPKM 32.4) and 25 other tissues.

Summary

Enables Enzyme binding activity and protein heterodimerization activity. Involved in positive regulation of macroautophagy; regulation of RNA metabolic process; and transcription elongation from RNA polymerase II promoter. Located in nucleoplasm. Part of DSIF complex. [provided by Alliance of Genome Resources, Apr 2022]

SUPT5H Products(6)

mRNA Protein Name
NM_001111020.3 NP_001104490.1 transcription elongation factor SPT5 isoform a
NM_001130824.2 NP_001124296.1 transcription elongation factor SPT5 isoform a
NM_001130825.2 NP_001124297.1 transcription elongation factor SPT5 isoform b
NM_001319990.2 NP_001306919.1 transcription elongation factor SPT5 isoform a
NM_001319991.2 NP_001306920.1 transcription elongation factor SPT5 isoform b
NM_003169.4 NP_003160.2 transcription elongation factor SPT5 isoform a

SUPT5H Protein Structure

Spt5_N

Spt5_N: Spt5 transcription elongation factor, acidic N-terminal (75 - 172)

Spt5-NGN

Spt5-NGN: Early transcription elongation factor of RNA pol II, NGN section (178 - 264)

KOW

KOW: KOW motif (475 - 499)

KOW

KOW: KOW motif (707 - 736)

CTD

CTD: Spt5 C-terminal nonapeptide repeat binding Spt4 (772 - 896)

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  • 1087 a.a.
Protein Preferred Names Protein Names

transcription elongation factor SPT5

DRB sensitivity-inducing factor 160 kDa subunit

Related Diseases

Diseases Alias
Immunodeficiency With Hyper-Igm, Type 2

HIGM2

Hyper-Igm Syndrome Type 2

Hyper-Igm Syndrome 2

Immunodeficiency With Hyper-Igm Type 2

Activation-Induced Cytidine Deaminase Deficiency

Aid Deficiency

Immunodeficiency With Hyper Igm Type 2

Hyper Igm Syndrome 2

Immunodeficiency With Hyper-Igm 2

Hyper-Igm Immunodeficiency Type 2

Immunodeficiency, With Hyper Igm, Type 2

Hyper-Igm Immunodeficiency Syndrome, Type 2

Ichthyosis, Congenital, Autosomal Recessive 11

Autosomal Recessive Congenital Ichthyosis 11

Ichthyosis With Hypotrichosis, Autosomal Recessive

Arih

Ichthyosis And Follicular Atrophoderma With Hypotrichosis And Hypohidrosis

Autosomal Recessive Ichthyosis With Hypotrichosis

ARCI11

Ifah

Hypotrichosis-Congenital Ichthyosis Syndrome

Ichthyosis-Follicular Atrophoderma-Hypotrichosis Syndrome

Ichthyosis-Follicular Atrophoderma-Hypotrichosis-Hypohidrosis Syndrome

Ichthyosis-Hypotrichosis Syndrome

Ifah Syndrome

Ihs

Immunodeficiency With Hyper-Igm, Type 1

Immunodeficiency, X-Linked, With Hyper-Igm

Hyper Igm Syndrome

HIGM1

Xhim

Hyper-Igm Syndrome

Higm

Hyper-Igm Syndrome 1

Immunodeficiency 3

Imd3

Immunodeficiency With Hyper-Igm

Immunodeficiency With Hyper Igm Type 1

Ihis

X-Linked Hyper Igm Syndrome

Hyper-Igm Immunodeficiency, X-Linked

Hyper Igm Immunodeficiency, X-Linked

Hyper Igm Syndrome 1

X-Linked Immunodeficiency With Hyper-Igm 1

Immunodeficiency, With Hyper Igm

Immunodeficiency, With Hyper Igm, Type 1

Hyper-Igm Immunodeficiency Syndrome, Type 1

Hyperimmunoglobulin M Syndrome

Autosomal Recessive Congenital Ichthyosis

Lamellar Ichthyosis

Congenital Ichthyosiform Erythroderma

Li

Congenital Nonbullous Ichthyosiform Erythroderma

Arci

Congenital Lamellar Ichthyosis

Nonbullous Congenital Ichthyosiform Erythroderma

Cie

Congenital Non-Bullous Ichthyosiform Erythroderma

Erythrodermic Ichthyosis

Nbcie

Ncie

Non-Bullous Congenital Ichthyosiform Erythroderma

Collodion Baby

Ichthyosis, Lamellar

Non Bullous Congenital Ichthyosiform Erythroderma

Ichthyosiform Erythroderma, Brocq Congenital, Nonbullous Form

Ichthyosiform Erythroderma, Congenital, Nonbullous, 1

Collodion Baby Syndrome

Ichthyoses, Lamellar

Nbie

Nonbullous Ichthyosiform Erythroderma

Classic Lamellar Ichthyosis

Ichthyosiform Erythroderma Nonbullous Congenital

Ichthyosiform Erythroderma Congenital

Ichthyosis, Congenital, Autosomal Recessive

Ichthyosiform Erythroderma, Congenital

Collodion Fetus

Non-Bullous Ichthyosiform Erythroderma

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Canis familiaris SUPT5H VGNC VGNC:46992
Mus musculus SUPT5H MGD MGI:1202400
Felis catus SUPT5H VGNC VGNC:65849
Macaca mulatta SUPT5H VGNC VGNC:78056
Bos taurus SUPT5H VGNC VGNC:35481
Rattus norvegicus SUPT5H RGD RGD:1563807