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  3. NIR‐fluorescent ceramide

NIR-fluorescent ceramide is a neutral near-infrared (NIF) fluorescent probe (λem=650 nm) based on the C-bridged nitrobenzoxadiazole SCOTfluor core, which enables visualization of lipid metabolic processes such as sphingolipid trafficking. The emission signal of NIR-fluorescent ceramide increases significantly in liposomal environments. NIR-fluorescent ceramide acts as an intracellular trafficking tracer, localizing to regions surrounding the endoplasmic reticulum and Golgi apparatus within a short period, and then translocating to recycling lysosomes over a longer period, thus enabling real-time visualization of sphingolipid trafficking and biological lipid functions in living cells. NIR-fluorescent ceramide also generates metabolic uptake profiles and provides multiple metabolic readouts in human cancer cell lines.

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NIR‐fluorescent ceramide

NIR‐fluorescent ceramide Chemical Structure

CAS No. : 2351937-34-1

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Description

NIR-fluorescent ceramide is a neutral near-infrared (NIF) fluorescent probe (λem=650 nm) based on the C-bridged nitrobenzoxadiazole SCOTfluor core, which enables visualization of lipid metabolic processes such as sphingolipid trafficking. The emission signal of NIR-fluorescent ceramide increases significantly in liposomal environments. NIR-fluorescent ceramide acts as an intracellular trafficking tracer, localizing to regions surrounding the endoplasmic reticulum and Golgi apparatus within a short period, and then translocating to recycling lysosomes over a longer period, thus enabling real-time visualization of sphingolipid trafficking and biological lipid functions in living cells. NIR-fluorescent ceramide also generates metabolic uptake profiles and provides multiple metabolic readouts in human cancer cell lines[1][2].

In Vitro

NIR‐fluorescent ceramide (compound 8) exhibits a fluorescence response property, with its fluorescence emission intensity increasing by approximately 15-fold in liposomes with a phosphatidylcholine/cholesterol ratio of 7:1[1].
NIR-fluorescent ceramide (50 nM; 15 min, 3 h) mainly localizes to the endoplasmic reticulum of A549 cells at 15 min post-treatment, and translocates to recycling lysosomes by 3 h post-treatment[1][2].

MedChemExpress (MCE) has not independently confirmed the accuracy of these methods. They are for reference only.

Immunofluorescence[1]

Cell Line: human A549 lung cancer cells
Concentration: 50 nM
Incubation Time: 15 min (imaging); 3 h (imaging)
Result: Showed high co-localization with ER Tracker Green (co-localization coefficient R = 0.91) and low co-localization with LysoTracker Blue (R = 0.26) at 15 min post-treatment.
Showed increased co-localization with LysoTracker Blue (R = 0.75) and reduced co-localization with ER Tracker Green (R = 0.49) at 3 h post-treatment.
Molecular Weight

601.82

Formula

C33H55N5O5

CAS No.
SMILES

CC1(C)N=C2C(NCCCCCC(N[C@@H]([C@@H](O)/C=C/CCCCCCCCCCCCC)CO)=O)=CC=C([N+]([O-])=O)C2=N1

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NIR‐fluorescent ceramide
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HY-D3198
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