SACM1L - SAC1 like phosphatidylinositide phosphatase Gene

Also Known as SAC1

Species: Homo sapiens

Gene Type: protein coding
Gene ID: 22908

About SACM1L

Cytogenetic location: 3p21.31 Genomic coordinates (GRCh38): 3:45,689,396-45,745,409 (from NCBI)

This gene has 17 transcripts (splice variants), 273 orthologues and 13 paralogues. Ubiquitous expression in thyroid (RPKM 28.5), lung (RPKM 17.8) and 25 other tissues.

Summary

This gene encodes an integral membrane protein, which is localized to the endoplasmic reticulum, and functions as a phosphoinositide Phosphatase that hydrolyzes phosphatidylinositol 3-phosphate, phosphatidylinositol 4-phosphate, and phosphatidylinositol 3,5-bisphosphate. Deletion of this gene in mouse results in preimplantation lethality. Other studies suggest that this gene is also involved in the organization of golgi membranes and mitotic spindles. Alternatively spliced transcript variants have been found for this gene. A C-terminally extended isoform is also predicted to be produced by the use of an alternative in-frame, downstream translation termination codon via a stop codon readthrough mechanism.[provided by RefSeq, Dec 2017]

SACM1L Products (4)

mRNA Protein Name
NM_001319071.2 NP_001306000.1 phosphatidylinositol-3-phosphatase SAC1 isoform 1x
NM_001319072.2 NP_001306001.1 phosphatidylinositol-3-phosphatase SAC1 isoform 2
NM_001319073.2 NP_001306002.1 phosphatidylinositol-3-phosphatase SAC1 isoform 3
NM_014016.5 NP_054735.3 phosphatidylinositol-3-phosphatase SAC1 isoform 1
Molecular Function GO Annotation Evidence References Source
enables phosphatidylinositol-4-phosphate phosphatase activity IDA
IDA: Inferred from direct assay
24209621 GOA
enables phosphatidylinositol-4-phosphate phosphatase activity IMP
IMP: Inferred from mutant phenotype
29461204 GOA
enables protein binding IPI
IPI: Inferred from physical interaction
14527956 GOA
Biological Process GO Annotation Evidence References Source
involved in phosphatidylinositol dephosphorylation IDA
IDA: Inferred from direct assay
24209621 GOA
Cellular Component GO Annotation Evidence References Source
located in Golgi apparatus IDA
IDA: Inferred from direct assay
31806350 GOA
located in Golgi membrane IDA
IDA: Inferred from direct assay
29461204 GOA
located in endoplasmic reticulum membrane IDA
IDA: Inferred from direct assay
27044890 GOA
located in endoplasmic reticulum-plasma membrane contact site IDA
IDA: Inferred from direct assay
27044890 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

SACM1L Protein Structure

Syja_N

Syja_N: SacI homology domain (57 - 350)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 500
  • 587 a.a.
Protein Preferred Names Protein Names

phosphatidylinositol-3-phosphatase SAC1

  • SAC1 suppressor of actin mutations 1 like

SACM1L Protein-protein interaction Information

Type
Protein Name Protein ID Interactor Interactor Species Interactor ID Detection Method References
Intra
SACM1L Q9NTJ5 JAGN1 Homo sapiens Q8N5M9 32296183
Intra
SACM1L Q9NTJ5 JAGN1 Homo sapiens Q8N5M9 32296183
Intra
SACM1L Q9NTJ5 COPG1 Homo sapiens Q9Y678 14527956
Intra
SACM1L Q9NTJ5 ARL13B Homo sapiens Q3SXY8 32296183
Intra
SACM1L Q9NTJ5 ARL13B Homo sapiens Q3SXY8 32296183
Intra
SACM1L Q9NTJ5 RTN3 Homo sapiens O95197-3 32296183
Intra
SACM1L Q9NTJ5 RTN3 Homo sapiens O95197-3 32296183
Intra
SACM1L Q9NTJ5 GPR151 Homo sapiens Q8TDV0 32296183
Intra
SACM1L Q9NTJ5 GPR151 Homo sapiens Q8TDV0 32296183
Intra
SACM1L Q9NTJ5 MFF Homo sapiens Q9GZY8-5 32296183
Intra
SACM1L Q9NTJ5 FMO3 Homo sapiens P31513 32296183
Intra
SACM1L Q9NTJ5 FMO3 Homo sapiens P31513 32296183
Intra
SACM1L Q9NTJ5 ODF4 Homo sapiens Q2M2E3 32296183
Intra
SACM1L Q9NTJ5 ODF4 Homo sapiens Q2M2E3 32296183
Intra
SACM1L Q9NTJ5 AQP6 Homo sapiens Q13520 32296183
Intra
SACM1L Q9NTJ5 AQP6 Homo sapiens Q13520 32296183
Intra
SACM1L Q9NTJ5 GPR152 Homo sapiens Q8TDT2 32296183
Intra
SACM1L Q9NTJ5 GPR152 Homo sapiens Q8TDT2 32296183
Intra
SACM1L Q9NTJ5 ACKR2 Homo sapiens O00590 32296183
Intra
SACM1L Q9NTJ5 ACKR2 Homo sapiens O00590 32296183
Intra
SACM1L Q9NTJ5 DHRS7 Homo sapiens Q9Y394 32296183
Intra
SACM1L Q9NTJ5 DHRS7 Homo sapiens Q9Y394 32296183
Intra
SACM1L Q9NTJ5 DHRS7 Homo sapiens Q9Y394 32296183
Intra
SACM1L Q9NTJ5 SCN3B Homo sapiens Q9NY72 32296183
Intra
SACM1L Q9NTJ5 SCN3B Homo sapiens Q9NY72 32296183
Intra
SACM1L Q9NTJ5 SCN3B Homo sapiens Q9NY72 32296183
Intra
SACM1L Q9NTJ5 SLC35C2 Homo sapiens Q9NQQ7-3 32296183
Intra
SACM1L Q9NTJ5 SLC35C2 Homo sapiens Q9NQQ7-3 32296183
Intra
SACM1L Q9NTJ5 TMEM167B Homo sapiens Q9NRX6 32296183
Intra
SACM1L Q9NTJ5 TMEM167B Homo sapiens Q9NRX6 32296183
Intra
SACM1L Q9NTJ5 MTERF2 Homo sapiens Q49AM1 32296183
Intra
SACM1L Q9NTJ5 MTERF2 Homo sapiens Q49AM1 32296183
Intra
SACM1L Q9NTJ5 HSD17B13 Homo sapiens Q7Z5P4 32296183
Intra
SACM1L Q9NTJ5 HSD17B13 Homo sapiens Q7Z5P4 32296183
Intra
SACM1L Q9NTJ5 SLC10A6 Homo sapiens Q3KNW5 32296183
Intra
SACM1L Q9NTJ5 SLC10A6 Homo sapiens Q3KNW5 32296183
Intra
SACM1L Q9NTJ5 SLC35A5 Homo sapiens Q9BS91 32296183
Intra
SACM1L Q9NTJ5 SLC35A5 Homo sapiens Q9BS91 32296183
Intra
SACM1L Q9NTJ5 RNF19B Homo sapiens Q6ZMZ0 32296183
Intra
SACM1L Q9NTJ5 RNF19B Homo sapiens Q6ZMZ0 32296183
Intra
SACM1L Q9NTJ5 FFAR2 Homo sapiens O15552 32296183
Intra
SACM1L Q9NTJ5 FFAR2 Homo sapiens O15552 32296183
Intra
SACM1L Q9NTJ5 MFSD14B Homo sapiens Q5SR56 32296183
Intra
SACM1L Q9NTJ5 MFSD14B Homo sapiens Q5SR56 32296183
Intra
SACM1L Q9NTJ5 ZFYVE27 Homo sapiens Q5T4F4 32296183
Intra
SACM1L Q9NTJ5 ZFYVE27 Homo sapiens Q5T4F4 32296183
Intra
SACM1L Q9NTJ5 EBP Homo sapiens Q15125 32296183
Intra
SACM1L Q9NTJ5 EBP Homo sapiens Q15125 32296183
Intra
SACM1L Q9NTJ5 SLC10A1 Homo sapiens Q14973 32296183
Intra
SACM1L Q9NTJ5 SLC10A1 Homo sapiens Q14973 32296183
Intra
SACM1L Q9NTJ5 SLC7A1 Homo sapiens P30825 32296183
Intra
SACM1L Q9NTJ5 SLC7A1 Homo sapiens P30825 32296183
Intra
SACM1L Q9NTJ5 TMX2 Homo sapiens Q9Y320 32296183
Intra
SACM1L Q9NTJ5 TMX2 Homo sapiens Q9Y320 32296183
Intra
SACM1L Q9NTJ5 TMX2 Homo sapiens Q9Y320 32296183
Intra
SACM1L Q9NTJ5 CREB3L1 Homo sapiens Q96BA8 32296183
Intra
SACM1L Q9NTJ5 CREB3L1 Homo sapiens Q96BA8 32296183
Intra
SACM1L Q9NTJ5 CD79A Homo sapiens P11912 32296183
Intra
SACM1L Q9NTJ5 CD79A Homo sapiens P11912 32296183
Cross: Cross-species interaction Intra: Intraspecies interaction

Related Diseases

Diseases Alias
Lenz-Majewski Hyperostotic Dwarfism
  • Lenz-Majewski Syndrome

  • Lenz Majewski Hyperostotic Dwarfism

  • LMHD

  • Hyperostotic Dwarfism Lenz-Majewski Type

  • Lenz-Majewski Hyperostotic Dysplasia

  • Multiple Congenital Anomalies, Intellectual Disability And Progressive Skeletal Sclerosis

  • Lms

Developmental And Epileptic Encephalopathy 53
  • DEE53

  • Epileptic Encephalopathy, Early Infantile, 53

  • Eiee53

  • Developmental And Epileptic Encephalopathy, 53

  • Early Infantile Epileptic Encephalopathy 53

Parkinson Disease 20, Early-Onset
  • Early-Onset Parkinson Disease 20

  • PARK20

  • Parkinson'S Disease 20

  • Early-Onset Parkinson'S Disease 20

  • Parkinson Disease, Type 20, Early-Onset

Charcot-Marie-Tooth Disease, Type 4j
  • Charcot-Marie-Tooth Disease Type 4j

  • CMT4J

  • Charcot-Marie-Tooth Disease, Autosomal Recessive, Type 4j

  • Autosomal Recessive Charcot-Marie-Tooth Disease Type 4j

  • Charcot-Marie-Tooth Disease 4j

Lowe Oculocerebrorenal Syndrome
  • Lowe Syndrome

  • Oculocerebrorenal Syndrome

  • OCRL

  • Oculocerebrorenal Syndrome Of Lowe

  • Ocrl1

  • Phosphatidylinositol 4,5-Bisphosphate 5-Phosphatase Deficiency

  • Lowe Disease

  • Phosphatidylinositol 4,5-Biphosphate 5-Phosphatase Deficiency

  • Cerebrooculorenal Syndrome

  • Phosphatidylinositol-4,5-Bisphosphate-5-Phosphatase Deficiency

  • Lowe Oculo-Cerebro-Renal Dystrophy

  • Lowe Oculo-Cerebro-Renal Syndrome

  • Lowe Oculocerebrorenal Dystrophy

  • Low

  • Chromosome 11p Deletion Syndrome

  • Oculocerebrorenal Dystrophy

  • Cerebro-Oculorenal Dystrophy

  • Ocrl1 - [Oculocerebrorenal Syndrome]

  • Lowe-Terrey-Maclachlan Syndrome

  • Renal-Oculocerebrodystrophy

Amyotrophic Lateral Sclerosis 8
  • Amyotrophic Lateral Sclerosis Type 8

  • ALS8

  • Sclerosis, Lateral, Amyotrophic, Type Type 8

Neuropathy, Congenital Hypomyelinating, 1, Autosomal Recessive
  • Charcot-Marie-Tooth Disease Type 4

  • Charcot-Marie-Tooth Disease Type 4e

  • Hereditary Motor And Sensory Neuropathy

  • Cmt4e

  • CHN1

  • Hypomyelinating Neuropathy, Congenital, 1

  • Charcot-Marie-Tooth Neuropathy Type 4e

  • Neuropathy, Congenital Hypomyelinating, 1

  • Ar-Cmt1

  • Autosomal Recessive Demyelinating Charcot-Marie-Tooth

  • Cmt4

  • Neuropathy, Congenital Hypomyelinating Or Amyelinating, Autosomal Recessive

  • Hypomyelination, Severe Congenital

  • Charcot-Marie-Tooth Disease, Type 4e

  • Charcot-Marie-Tooth Neuropathy, Type 4e

  • Autosomal Recessive Congenital Hypomyelinating Or Amyelinating Neuropathy

  • Autosomal Recessive Congenital Hypomyelinating Neuropathy

  • Congenital Amyelinating Neuropathy

  • Congenital Hypomyelinating Neuropathy Autosomal Recessive

  • Neuropathy, Congenital Hypomyelinating Or Amyelinating

  • Severe Congenital Hypomyelination

  • Hereditary Sensory Motor Neuropathy

  • Charcot-Marie-Tooth Disease, Demyelinating, Autosomal Recessive

  • Neuropathy, Hypomyelinating, Congenital, Type 1

  • Neuropathy, Motor And Sensory, Hereditary

  • Congenital Hypomyelinating Neuropathy

  • Hereditary Motor And Sensory Neuropathies

  • Hereditary Sensorimotor Neuropathy

  • Hmsn - [Hereditary Motor And Sensory Neuropathy]

  • Hsmn - [Hereditary Sensory And Motor Neuropathy]

  • Hereditary Motor And Sensory Neuropathy, Types I-Iv

Sciatic Neuropathy
Myopathy, Centronuclear, X-Linked
  • X-Linked Myotubular Myopathy

  • Xlmtm

  • X-Linked Centronuclear Myopathy

  • Xlcnm

  • CNMX

  • Mtm1

  • Myotubular Myopathy, X-Linked

  • Mtmx

  • Myotubular Myopathy 1

  • Centronuclear Myopathy X-Linked

  • Myotubular Myopathy

  • Mtm

  • Cnm

  • Xmtm

  • Myotubular Myopathy Type 1

Joubert Syndrome 1
  • Joubert Syndrome

  • Jbts

  • Cerebellooculorenal Syndrome 1

  • JBTS1

  • Joubert-Boltshauser Syndrome

  • Cerebelloparenchymal Disorder Iv

  • Cpd4

  • Cors1

  • Joubert Syndrome And Related Disorders

  • Jsrd

  • Familial Aplasia Of The Vermis

  • Joubert Syndrome Related Disorders

  • Js

  • Cerebellar Vermis Agenesis

  • Cerebelloparenchymal Disorder 4

  • Agenesis Of Cerebellar Vermis

  • Cerebello-Oculo-Renal Syndrome

  • Cors

  • Joubert-Bolthauser Syndrome

  • Cpd Iv

  • Classic Joubert Syndrome

  • Joubert Syndrome Type A

  • Pure Joubert Syndrome

  • Cerebello-Oculo-Renal Syndrome 1

  • Joubert Syndrome-1

  • Joubert Syndrome, Type 1

  • Joubert'S Syndrome

Parkinson Disease, Late-Onset
  • Parkinson Disease

  • Parkinson'S Disease

  • PD

  • PARK

  • Parkinson Disease, Susceptibility To

  • Late Onset Parkinson'S Disease

  • Late Onset Parkinson Disease

  • Paralysis Agitans

  • Primary Parkinsonism

  • Idiopathic Parkinson Disease

  • Parkinson'S

  • Parkinson Disease, Late-Onset, Susceptibility To

  • Parkinson Disease, Age Of Onset, Modifier

  • Lewy Body Parkinson Disease

  • Idiopathic Parkinson'S Disease

  • Pd - [Parkinson Disease]

  • Parkinson Disease Nos

  • Parkinson, Nos

  • Primary Parkinson Disease

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Rattus norvegicus SACM1L RGD RGD:69223
Bos taurus SACM1L VGNC VGNC:34259
Macaca mulatta SACM1L VGNC VGNC:77034
Felis catus SACM1L VGNC VGNC:64851
Mus musculus SACM1L MGD MGI:1933169
Canis familiaris SACM1L VGNC VGNC:45841
Others SACM1L NCBI