PTPRM - protein tyrosine phosphatase receptor type M Gene
Also Known as RPTPM; RPTPU; PTPRL1; hR-PTPu; R-PTP-MU
Species: Homo sapiens
About PTPRM
This gene has 15 transcripts (splice variants), 283 orthologues and 35 paralogues. Broad expression in fat (RPKM 28.8), thyroid (RPKM 25.6) and 23 other tissues.
Summary
The protein encoded by this gene is a member of the protein tyrosine Phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic transformation. This PTP possesses an extracellular region, a single transmembrane region, and two tandem catalytic domains, and thus represents a receptor-type PTP. The extracellular region contains a meprin-A5 antigen-PTP mu (MAM) domain, an Ig-like domain and four fibronectin type III-like repeats. This PTP has been shown to mediate cell-cell aggregation through the interaction with another molecule of this PTP on an adjacent cell. This PTP can interact with scaffolding protein RACK1/GNB2L1, which may be necessary for the downstream signaling in response to cell-cell adhesion. Alternative splicing results in multiple transcripts encoding distinct isoforms. [provided by RefSeq, Jul 2008]
PTPRM Products (8)
| mRNA | Protein | Name |
|---|---|---|
| NM_001105244.2 | NP_001098714.1 | receptor-type tyrosine-protein phosphatase mu isoform 1 precursor |
| NM_001378142.1 | NP_001365071.1 | receptor-type tyrosine-protein phosphatase mu isoform 3 |
| NM_001378143.1 | NP_001365072.1 | receptor-type tyrosine-protein phosphatase mu isoform 4 |
| NM_001378144.1 | NP_001365073.1 | receptor-type tyrosine-protein phosphatase mu isoform 5 |
| NM_001378145.1 | NP_001365074.1 | receptor-type tyrosine-protein phosphatase mu isoform 6 |
| NM_001378146.1 | NP_001365075.1 | receptor-type tyrosine-protein phosphatase mu isoform 7 |
| NM_001378147.1 | NP_001365076.1 | receptor-type tyrosine-protein phosphatase mu isoform 8 |
| NM_002845.4 | NP_002836.3 | receptor-type tyrosine-protein phosphatase mu isoform 2 precursor |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables cadherin binding |
IDA
IDA: Inferred from direct assay
|
9531566 | GOA |
| enables identical protein binding |
IPI
IPI: Inferred from physical interaction
|
10809770 | GOA |
| enables phosphatase activity |
IDA
IDA: Inferred from direct assay
|
10753936 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
9531566 | GOA |
| enables protein tyrosine phosphatase activity |
IDA
IDA: Inferred from direct assay
|
8393854 | GOA |
| enables transmembrane receptor protein tyrosine phosphatase activity |
IDA
IDA: Inferred from direct assay
|
10809770 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in adherens junction |
IDA
IDA: Inferred from direct assay
|
17965016 | GOA |
| is active in cell-cell junction |
IDA
IDA: Inferred from direct assay
|
10753936 | GOA |
| located in cell-cell junction |
IDA
IDA: Inferred from direct assay
|
15491993 | GOA |
| located in cytoplasm |
IDA
IDA: Inferred from direct assay
|
16380380 | GOA |
| located in lamellipodium |
IDA
IDA: Inferred from direct assay
|
15706045 | GOA |
| located in perinuclear region of cytoplasm |
IDA
IDA: Inferred from direct assay
|
15491993 | GOA |
PTPRM Protein Structure
MAM: MAM domain, meprin/A5/mu (27 - 183)
ig: Immunoglobulin domain (199 - 261)
fn3: Fibronectin type III domain (287 - 361)
fn3: Fibronectin type III domain (498 - 574)
Y_phosphatase: Protein-tyrosine phosphatase (923 - 1153)
Y_phosphatase: Protein-tyrosine phosphatase (1213 - 1447)
- 0
- 300
- 600
- 900
- 1200
- 1452 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
receptor-type tyrosine-protein phosphatase mu |
|
PTPRM Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
PTPRM | P28827 | PTPRM | Homo sapiens | P28827 | 10809770 | |
|
Intra
|
PTPRM | P28827 | PTPRM | Homo sapiens | P28827 | 10809770 | |
|
Intra
|
PTPRM | P28827 | H2BC5 | Homo sapiens | P58876 | 30021884 | |
|
Intra
|
PTPRM | P28827 | H2BC21 | Homo sapiens | Q16778 | 30021884 | |
|
Intra
|
PTPRM | P28827 | DTNBP1 | Homo sapiens | Q96EV8 | 27880917 | |
|
Intra
|
PTPRM | P28827 | NHSL1 | Homo sapiens | Q5SYE7 | 27880917 | |
|
Intra
|
PTPRM | P28827 | nagA | Bacillus anthracis | A0A6L8NZ66 | 20711500 | |
|
Intra
|
PTPRM | P28827 | EHD4 | Homo sapiens | Q9H223 | 27880917 | |
|
Intra
|
PTPRM | P28827 | LMTK2 | Homo sapiens | Q8IWU2 | 27880917 | |
|
Intra
|
PTPRM | P28827 | Cdh2 | Mus musculus | P15116 | 9531566 | |
|
Cross
|
PTPRM | P28827 | Cdh1 | Mus musculus | P09803 | 9531566 | |
|
Intra
|
PTPRM | P28827 | PTPRM | Homo sapiens | P28827 | 15978577 | |
|
Intra
|
PTPRM | P28827 | SELENBP1 | Homo sapiens | Q13228 | 33961781 | |
|
Intra
|
PTPRM | P28827 | Cdh4 | Mus musculus | P39038 | 9531566 | |
|
Intra
|
PTPRM | P28827 | CDC42BPA | Homo sapiens | Q5VT25 | 27880917 |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Schizophrenia |
|
|
| Spastic Hemiplegia |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Macaca mulatta | PTPRM | VGNC | VGNC:76619 |
| Felis catus | PTPRM | VGNC | VGNC:69177 |
| Bos taurus | PTPRM | VGNC | VGNC:33553 |
| Rattus norvegicus | PTPRM | RGD | RGD:620776 |
| Mus musculus | PTPRM | MGD | MGI:102694 |
| Canis familiaris | PTPRM | VGNC | VGNC:45192 |
| Others | PTPRM | NCBI |