Whrn - whirlin Gene
Also Known as Cip98; Dfnb31
Species: Rattus norvegicus
Summary
Enables protein domain specific binding activity. Predicted to be involved in several processes, including detection of mechanical stimulus involved in sensory perception of sound; nervous system development; and paranodal junction maintenance. Predicted to act upstream of or within establishment of protein localization and positive regulation of gene expression. Located in several cellular components, including dendrite; stereocilia ankle link; and stereocilium tip. Colocalizes with neuronal cell body; photoreceptor connecting cilium; and photoreceptor inner segment. Human ortholog(s) of this gene implicated in Usher syndrome type 2D; autosomal recessive nonsyndromic deafness 31; and sensorineural hearing loss. Orthologous to human WHRN (whirlin). [provided by Alliance of Genome Resources, Apr 2022]
Whrn Products (2)
| mRNA | Protein | Name |
|---|---|---|
| NM_001389267.1 | NP_001376196.1 | whirlin isoform 2 |
| NM_181088.2 | NP_851602.2 | whirlin isoform 1 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables protein domain specific binding |
IPI
IPI: Inferred from physical interaction
|
12641734 | RGD |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in apical dendrite |
IDA
IDA: Inferred from direct assay
|
12641734 | RGD |
| located in axon collateral |
IDA
IDA: Inferred from direct assay
|
12641734 | RGD |
| located in dendritic shaft |
IDA
IDA: Inferred from direct assay
|
12641734 | RGD |
| located in neuronal cell body |
IDA
IDA: Inferred from direct assay
|
12641734 | RGD |
| located in perinuclear region of cytoplasm |
IDA
IDA: Inferred from direct assay
|
12641734 | RGD |
| located in photoreceptor connecting cilium |
IDA
IDA: Inferred from direct assay
|
16434480 | RGD |
| located in photoreceptor inner segment |
IDA
IDA: Inferred from direct assay
|
16434480 | RGD |
| located in postsynapse |
IDA
IDA: Inferred from direct assay
|
12641734 | RGD |
| located in presynapse |
IDA
IDA: Inferred from direct assay
|
12641734 | RGD |
| located in stereocilia ankle link |
IDA
IDA: Inferred from direct assay
|
23055499 | RGD |
| located in stereocilium |
IDA
IDA: Inferred from direct assay
|
16434480 | RGD |
| located in stereocilium tip |
IDA
IDA: Inferred from direct assay
|
23055499 | RGD |
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
whirlin |
|