NOP58 - NOP58 ribonucleoprotein Gene

Also Known as NOP5; HSPC120; NOP5/NOP58

Species: Homo sapiens

Gene Type: protein coding
Gene ID: 51602

About NOP58

Cytogenetic location: 2q33.1 Genomic coordinates (GRCh38): 2:202,265,763-202,303,661 (from NCBI)

This gene has 10 transcripts (splice variants), 215 orthologues and 1 paralogue. Ubiquitous expression in bone marrow (RPKM 29.6), lymph node (RPKM 29.1) and 25 other tissues.

Summary

The protein encoded by this gene is a core component of box C/D small nucleolar ribonucleoproteins. Some box C/D small nucleolar RNAs (snoRNAs), such as U3, U8, and U14, are dependent upon the encoded protein for their synthesis. This protein is SUMOylated, which is necessary for high affinity binding to snoRNAs. [provided by RefSeq, Nov 2015]

NOP58 Products (1)

mRNA Protein Name
NM_015934.5 NP_057018.1 nucleolar protein 58
Molecular Function GO Annotation Evidence References Source
enables ATPase binding IPI
IPI: Inferred from physical interaction
17636026 GOA
enables TFIID-class transcription factor complex binding IPI
IPI: Inferred from physical interaction
17636026 GOA
enables protein binding IPI
IPI: Inferred from physical interaction
17636026 GOA
enables snoRNA binding IDA
IDA: Inferred from direct assay
17636026 GOA
Biological Process GO Annotation Evidence References Source
involved in ribosomal small subunit biogenesis IDA
IDA: Inferred from direct assay
34516797 GOA
involved in snoRNA localization IMP
IMP: Inferred from mutant phenotype
17636026 GOA
Cellular Component GO Annotation Evidence References Source
located in Cajal body IDA
IDA: Inferred from direct assay
16687569 GOA
part of box C/D methylation guide snoRNP complex IDA
IDA: Inferred from direct assay
33367824 GOA
located in nucleolus IDA
IDA: Inferred from direct assay
16687569 GOA
part of pre-snoRNP complex IDA
IDA: Inferred from direct assay
17636026 GOA
part of small-subunit processome IDA
IDA: Inferred from direct assay
34516797 GOA
part of sno(s)RNA-containing ribonucleoprotein complex IDA
IDA: Inferred from direct assay
17636026 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

NOP58 Protein Structure

NOP5NT

NOP5NT: NOP5NT (NUC127) domain (1 - 66)

(161 - 213)

Nop

Nop: snoRNA binding domain, fibrillarin (253 - 400)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 500
  • 529 a.a.
Protein Preferred Names Protein Names

nucleolar protein 58

  • NOP58 ribonucleoprotein homolog

NOP58 Protein-protein interaction Information

Type
Protein Name Protein ID Interactor Interactor Species Interactor ID Detection Method References
Intra
NOP58 Q9Y2X3 NUFIP1 Homo sapiens Q9UHK0 17636026
Intra
NOP58 Q9Y2X3 NUFIP1 Homo sapiens Q9UHK0 35271311
Intra
NOP58 Q9Y2X3 NOPCHAP1 Homo sapiens Q8N5I9 35271311
Intra
NOP58 Q9Y2X3 NOPCHAP1 Homo sapiens Q8N5I9 33961781
Intra
NOP58 Q9Y2X3 SNU13 Homo sapiens P55769 30021884
Intra
NOP58 Q9Y2X3 SNU13 Homo sapiens P55769 35271311
Intra
NOP58 Q9Y2X3 TGS1 Homo sapiens Q96RS0 21522132
Cross: Cross-species interaction Intra: Intraspecies interaction

Related Diseases

Diseases Alias
Dyskeratosis Congenita
  • Dyskeratosis Congenita Autosomal Dominant

  • Dc

  • Dkc

  • Zinsser-Engman-Cole Syndrome

  • Dyskeratosis Congenita, Autosomal Dominant

  • Autosomal Dominant Dyskeratosis Congenita

  • Dkca

  • Dyskeratosis Congenita Scoggins Type

  • Zinsser-Cole-Engman Syndrome

  • X-Linked Dyskeratosis Congenita

  • Hoyeraal-Hreidarsson Syndrome

Diamond-Blackfan Anemia
  • Congenital Pure Red Cell Aplasia

  • Aase Syndrome

  • Erythrogenesis Imperfecta

  • Anemia, Diamond-Blackfan

  • Congenital Hypoplastic Anemia

  • Aase-Smith Ii Syndrome

  • Bds

  • Blackfan-Diamond Anemia

  • Congenital Prca

  • Congenital Hypoplastic Anemia, Blackfan-Diamond Type

  • Dba

  • Blackfan - Diamond Syndrome

  • Chronic Constitutional Pure Red Cell Anaemia

  • Anemia Diamond Blackfan Type

  • Anemia Congenital Erythroid Hypoplastic

  • Aregenerative Anemia Chronic Congenital

  • Blackfan Diamond Syndrome

  • Red Cell Aplasia, Pure Hereditary

  • Aase-Smith Syndrome Ii

  • Bda

  • Blackfan Diamond Anemia

  • Blackfan-Diamond Disease

  • Blackfan-Diamond Syndrome

  • Chronic Congenital Agenerative Anemia

  • Congenital Erythroid Hypoplastic Anemia

  • Congenital Hypoplastic Anemia Of Blackfan And Diamond

  • Congenital Pure Red Cell Anemia

  • Hypoplastic Congenital Anemia

  • Inherited Erythroblastopenia

  • Pure Hereditary Red Cell Aplasia

  • Anemia, Hypoplastic, Congenital

  • Anemia Hypoplastic Congenital

  • Fanconi Anemia

  • Constitutional Aplastic Anemia

  • Diamond-Blackfan Anemia 1

  • Aase Smith Syndrome 2

  • Congenital Red Cell Aplasia

  • Red Cell Aplasia Of Infants

  • Pure Red Cell Aplasia Of Infants

  • Congenital Red Cell Aplastic Anaemia

  • Congenital Pure Red Cell Anaemia

  • Congenital Erythroid Hypoplasia

  • Pearson Marrow-Pancreas Syndrome

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Rattus norvegicus NOP58 RGD RGD:620484
Canis familiaris NOP58 VGNC VGNC:43892
Bos taurus NOP58 VGNC VGNC:32170
Felis catus NOP58 VGNC VGNC:63859
Macaca mulatta NOP58 VGNC VGNC:75284
Mus musculus NOP58 MGD MGI:1933184
Others NOP58 NCBI