Ush1c - USH1 protein network component harmonin Gene
Also Known as harmonin; 2010016F01Rik
Species: Mus musculus
Summary
Predicted to enable Myosin tail binding activity and spectrin binding activity. Involved in brush border assembly; protein localization to microvillus; and regulation of microvillus length. Acts upstream of or within several processes, including inner ear development; parallel actin filament bundle assembly; and sensory perception of sound. Located in several cellular components, including brush border; photoreceptor inner segment; and upper tip-link density. Is expressed in several structures, including alimentary system; cochlea; genitourinary system; heart; and lung epithelium. Used to study Usher syndrome type 1C and autosomal recessive nonsyndromic deafness 18A. Human ortholog(s) of this gene implicated in Usher syndrome; Usher syndrome type 1; Usher syndrome type 1C; and autosomal recessive nonsyndromic deafness 18A. Orthologous to human USH1C (USH1 protein network component harmonin). [provided by Alliance of Genome Resources, Apr 2022]
Ush1c Products (4)
| mRNA | Protein | Name |
|---|---|---|
| NM_001163733.1 | NP_001157205.1 | harmonin isoform b4 |
| NM_001291182.1 | NP_001278111.1 | harmonin isoform b2 |
| NM_023649.2 | NP_076138.2 | harmonin isoform a1 |
| NM_153677.2 | NP_710143.2 | harmonin isoform b3 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
12485990 | MGI |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in brush border |
IDA
IDA: Inferred from direct assay
|
22114352 | MGI |
| located in microvillus |
IDA
IDA: Inferred from direct assay
|
24725409 | MGI |
| located in photoreceptor inner segment |
IDA
IDA: Inferred from direct assay
|
14578428 | MGI |
| located in photoreceptor outer segment |
IDA
IDA: Inferred from direct assay
|
14578428 | MGI |
| located in plasma membrane |
IDA
IDA: Inferred from direct assay
|
15461667 | MGI |
| is active in stereocilium |
EXP
EXP: Inferred from Experiment
|
26754646 | MGI |
| located in stereocilium |
IDA
IDA: Inferred from direct assay
|
12485990 | MGI |
| located in synapse |
IDA
IDA: Inferred from direct assay
|
14578428 | MGI |
| located in upper tip-link density |
IDA
IDA: Inferred from direct assay
|
31448880 | MGI |
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
harmonin |
|
|
Ush1c Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
Ush1c | Q9ES64 | Pcdh15 | Mus musculus | Q99PJ1 | 15590703 | |
|
Intra
|
Ush1c | Q9ES64 | Pcdh15 | Mus musculus | Q99PJ1 | 15928608 |