RPS27A - ribosomal protein S27a Gene
Also Known as UBC; S27A; CEP80; UBA80; HEL112; UBCEP1; UBCEP80
Species: Homo sapiens
About RPS27A
This gene has 10 transcripts (splice variants), 112 orthologues and 10 paralogues. Ubiquitous expression in ovary (RPKM 575.2), lymph node (RPKM 347.6) and 25 other tissues.
Summary
Ubiquitin, a highly conserved protein that has a major role in targeting cellular proteins for degradation by the 26S proteosome, is synthesized as a precursor protein consisting of either polyubiquitin chains or a single ubiquitin fused to an unrelated protein. This gene encodes a fusion protein consisting of ubiquitin at the N terminus and ribosomal protein S27a at the C terminus. When expressed in yeast, the protein is post-translationally processed, generating free ubiquitin monomer and ribosomal protein S27a. Ribosomal protein S27a is a component of the 40S subunit of the ribosome and belongs to the S27AE family of ribosomal proteins. It contains C4-type zinc finger domains and is located in the cytoplasm. Pseudogenes derived from this gene are present in the genome. As with ribosomal protein S27a, ribosomal protein L40 is also synthesized as a fusion protein with ubiquitin; similarly, ribosomal protein S30 is synthesized as a fusion protein with the Ubiquitin-Like Protein FUBI. Multiple alternatively spliced transcript variants that encode the same proteins have been identified.[provided by RefSeq, Sep 2008]
RPS27A Products (3)
| mRNA | Protein | Name |
|---|---|---|
| NM_001135592.2 | NP_001129064.1 | ubiquitin-40S ribosomal protein S27a precursor |
| NM_001177413.1 | NP_001170884.1 | ubiquitin-40S ribosomal protein S27a precursor |
| NM_002954.6 | NP_002945.1 | ubiquitin-40S ribosomal protein S27a precursor |
| Molecular Function GO Annotation | Evidence | Références | Source |
|---|---|---|---|
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
14755250 | GOA |
| enables structural constituent of ribosome |
IDA
IDA: Inferred from direct assay
|
23636399 | GOA |
| Biological Process GO Annotation | Evidence | Références | Source |
|---|---|---|---|
| involved in ribosomal small subunit biogenesis |
IDA
IDA: Inferred from direct assay
|
34516797 | GOA |
| Cellular Component GO Annotation | Evidence | Références | Source |
|---|---|---|---|
| located in cytosolic ribosome |
IDA
IDA: Inferred from direct assay
|
23636399 | GOA |
| part of cytosolic small ribosomal subunit |
IDA
IDA: Inferred from direct assay
|
8706699 | GOA |
| part of small-subunit processome |
IDA
IDA: Inferred from direct assay
|
34516797 | GOA |
RPS27A Protein Structure
ubiquitin: Ubiquitin family (6 - 74)
Ribosomal_S27: Ribosomal protein S27a (101 - 147)
- 0
- 100
- 156 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
ubiquitin-40S ribosomal protein S27a |
|
RPS27A Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | Références |
|---|---|---|---|---|---|---|---|
|
Intra
|
RPS27A | P62979 | FAM168A | Homo sapiens | Q92567-2 | 32296183 | |
|
Intra
|
RPS27A | P62979 | MTURN | Homo sapiens | Q8N3F0 | 32296183 | |
|
Intra
|
RPS27A | P62979 | EPN3 | Homo sapiens | I6L9I8 | 32296183 | |
|
Intra
|
RPS27A | P62979 | EPN3 | Homo sapiens | I6L9I8 | 32296183 | |
|
Intra
|
RPS27A | P62979 | DESI1 | Homo sapiens | Q6ICB0 | 32296183 | |
|
Intra
|
RPS27A | P62979 | HSPB1 | Homo sapiens | P04792 | 32814053 | |
|
Intra
|
RPS27A | P62979 | HSPB1 | Homo sapiens | P04792 | 32814053 | |
|
Intra
|
RPS27A | P62979 | HSPB1 | Homo sapiens | P04792 | 32814053 | |
|
Intra
|
RPS27A | P62979 | PLEKHB2 | Homo sapiens | Q96CS7 | 32296183 | |
|
Intra
|
RPS27A | P62979 | RNF11 | Homo sapiens | Q9Y3C5 | 32814053 | |
|
Intra
|
RPS27A | P62979 | RNF11 | Homo sapiens | Q9Y3C5 | 32814053 | |
|
Intra
|
RPS27A | P62979 | RNF11 | Homo sapiens | Q9Y3C5 | 32814053 | |
|
Intra
|
RPS27A | P62979 | WFS1 | Homo sapiens | O76024 | 32814053 | |
|
Intra
|
RPS27A | P62979 | WFS1 | Homo sapiens | O76024 | 32814053 | |
|
Intra
|
RPS27A | P62979 | WFS1 | Homo sapiens | O76024 | 32814053 | |
|
Intra
|
RPS27A | P62979 | DAZAP2 | Homo sapiens | Q15038 | 25416956 | |
|
Intra
|
RPS27A | P62979 | DAZAP2 | Homo sapiens | Q15038 | 32296183 | |
|
Intra
|
RPS27A | P62979 | DAZAP2 | Homo sapiens | Q15038 | 32296183 | |
|
Intra
|
RPS27A | P62979 | DAZAP2 | Homo sapiens | Q15038 | 25416956 | |
|
Intra
|
RPS27A | P62979 | DAZAP2 | Homo sapiens | Q15038 | 32296183 | |
|
Intra
|
RPS27A | P62979 | DAZAP2 | Homo sapiens | Q15038 | 16189514 | |
|
Intra
|
RPS27A | P62979 | LITAF | Homo sapiens | Q99732 | 32296183 | |
|
Intra
|
RPS27A | P62979 | CALCOCO2 | Homo sapiens | Q13137 | 25416956 | |
|
Intra
|
RPS27A | P62979 | UBQLN1 | Homo sapiens | Q9UMX0 | 32296183 | |
|
Intra
|
RPS27A | P62979 | UBQLN1 | Homo sapiens | Q9UMX0 | 32296183 | |
|
Intra
|
RPS27A | P62979 | UBQLN1 | Homo sapiens | Q9UMX0 | 32296183 | |
|
Intra
|
RPS27A | P62979 | PLSCR4 | Homo sapiens | Q9NRQ2 | 32296183 | |
|
Intra
|
RPS27A | P62979 | UBQLN2 | Homo sapiens | Q9UHD9 | 32296183 | |
|
Intra
|
RPS27A | P62979 | UBQLN2 | Homo sapiens | Q9UHD9 | 32296183 | |
|
Intra
|
RPS27A | P62979 | UBQLN2 | Homo sapiens | Q9UHD9 | 32296183 |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Machado-Joseph Disease |
|
|
| Neuronal Intranuclear Inclusion Disease |
|
|
| Oculopharyngeal Muscular Dystrophy |
|
|
| Frontotemporal Dementia |
|
|
| Motor Neuron Disease |
|
|
| Influenza |
|
|
| Pick Disease Of Brain |
|
|
| Frontotemporal Lobar Degeneration With Tdp43 Inclusions, Grn-Related |
|
|
| Inclusion Body Myositis |
|
|
| Paget'S Disease Of Bone |
|
|
| Amyloidosis |
|
|
| Alexander Disease |
|
|
| Rem Sleep Behavior Disorder |
|
|
| Myopathy, Myofibrillar, 1 |
|
|
| Dementia |
|
|
| Angelman Syndrome |
|
|
| Diamond-Blackfan Anemia |
|
|
| Parkinsonism |
|
|
| Cystic Fibrosis |
|
|
| Creutzfeldt-Jakob Disease |
|
|
| Myoclonic Epilepsy Of Lafora |
|
|
| Dementia, Lewy Body |
|
|
| Supranuclear Palsy, Progressive, 1 |
|
|
| Multiple System Atrophy 1 |
|
|
| Neurodegeneration With Brain Iron Accumulation 2a |
|
|
| Amyotrophic Lateral Sclerosis 1 |
|
|
| Myopathy |
|
|
| Striatonigral Degeneration |
|
|
| Autosomal Dominant Cerebellar Ataxia |
|
|
| Parkinson Disease, Late-Onset |
|
|
| Alzheimer Disease, Familial, 1 |
|
|
| Huntington Disease |
|
|
| Gastrointestinal Stromal Tumor |
|
|
| Movement Disease |
|
|
| Acute Promyelocytic Leukemia |
|
|
| Fanconi Anemia, Complementation Group A |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Bos taurus | RPS27A | VGNC | VGNC:34135 |
| Mus musculus | RPS27A | MGD | MGI:1925544 |
| Macaca mulatta | RPS27A | VGNC | VGNC:103857 |
| Felis catus | RPS27A | VGNC | VGNC:64752 |
| Rattus norvegicus | RPS27A | RGD | RGD:6489478 |
| Canis familiaris | RPS27A | VGNC | VGNC:54540 |
| Others | RPS27A | NCBI |