CBX5 - chromobox 5 Gene
Also Known as HP1; HP1A; HEL25
Species: Homo sapiens
About CBX5
This gene has 6 transcripts (splice variants), 205 orthologues and 8 paralogues. Ubiquitous expression in brain (RPKM 15.3), thyroid (RPKM 14.2) and 25 other tissues.
Summary
This gene encodes a highly conserved nonhistone protein, which is a member of the heterochromatin protein family. The protein is enriched in the heterochromatin and associated with centromeres. The protein has a single N-terminal chromodomain which can bind to histone proteins via methylated lysine residues, and a C-terminal chromo shadow-domain (CSD) which is responsible for the homodimerization and interaction with a number of chromatin-associated nonhistone proteins. The encoded product is involved in the formation of functional kinetochore through interaction with essential kinetochore proteins. The gene has a pseudogene located on chromosome 3. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Jul 2008]
CBX5 Products (3)
| mRNA | Protein | Name |
|---|---|---|
| NM_001127321.1 | NP_001120793.1 | chromobox protein homolog 5 |
| NM_001127322.1 | NP_001120794.1 | chromobox protein homolog 5 |
| NM_012117.3 | NP_036249.1 | chromobox protein homolog 5 |
CBX5 Protein Structure
Chromo: Chromo (CHRromatin Organisation MOdifier) domain (20 - 68)
Chromo_shadow: Chromo shadow domain (119 - 176)
- 0
- 100
- 191 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
chromobox protein homolog 5 |
|
CBX5 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
CBX5 | P45973 | CHAF1A | Homo sapiens | Q13111 | 20562864 | |
|
Intra
|
CBX5 | P45973 | CHAF1A | Homo sapiens | Q13111 | 20562864 | |
|
Intra
|
CBX5 | P45973 | CHAF1A | Homo sapiens | Q13111 | 19498464 | |
|
Intra
|
CBX5 | P45973 | CHAF1A | Homo sapiens | Q13111 | 24981860 | |
|
Intra
|
CBX5 | P45973 | CHAF1A | Homo sapiens | Q13111 | 27705803 | |
|
Intra
|
CBX5 | P45973 | LBR | Homo sapiens | Q14739 | 8663349 | |
|
Intra
|
CBX5 | P45973 | MFSD10 | Homo sapiens | Q14728 | 32814053 | |
|
Intra
|
CBX5 | P45973 | MFSD10 | Homo sapiens | Q14728 | 32814053 | |
|
Intra
|
CBX5 | P45973 | MFSD10 | Homo sapiens | Q14728 | 32814053 | |
|
Intra
|
CBX5 | P45973 | ZNF280D | Homo sapiens | Q6N043-2 | 32296183 | |
|
Intra
|
CBX5 | P45973 | ZNF280D | Homo sapiens | Q6N043-2 | 32296183 | |
|
Intra
|
CBX5 | P45973 | ZNF280D | Homo sapiens | Q6N043-2 | 32296183 | |
|
Intra
|
CBX5 | P45973 | POGZ | Homo sapiens | Q7Z3K3 | 19498464 | |
|
Intra
|
CBX5 | P45973 | POGZ | Homo sapiens | Q7Z3K3 | 20562864 | |
|
Intra
|
CBX5 | P45973 | POGZ | Homo sapiens | Q7Z3K3 | 24981860 | |
|
Intra
|
CBX5 | P45973 | POGZ | Homo sapiens | Q7Z3K3 | 27705803 | |
|
Intra
|
CBX5 | P45973 | ADNP | Homo sapiens | Q9H2P0 | 27705803 | |
|
Intra
|
CBX5 | P45973 | ADNP | Homo sapiens | Q9H2P0 | 20562864 | |
|
Intra
|
CBX5 | P45973 | ATG13 | Homo sapiens | O75143-2 | 32814053 | |
|
Intra
|
CBX5 | P45973 | ATG13 | Homo sapiens | O75143-2 | 32814053 | |
|
Intra
|
CBX5 | P45973 | ATG13 | Homo sapiens | O75143-2 | 32814053 | |
|
Intra
|
CBX5 | P45973 | NSD3 | Homo sapiens | Q9BZ95-3 | 32814053 | |
|
Intra
|
CBX5 | P45973 | NSD3 | Homo sapiens | Q9BZ95-3 | 32814053 | |
|
Intra
|
CBX5 | P45973 | NSD3 | Homo sapiens | Q9BZ95-3 | 32814053 | |
|
Intra
|
CBX5 | P45973 | LAP3 | Homo sapiens | P28838 | 32296183 | |
|
Intra
|
CBX5 | P45973 | NSL1 | Homo sapiens | Q96IY1 | 32814053 | |
|
Intra
|
CBX5 | P45973 | NSL1 | Homo sapiens | Q96IY1 | 24981860 | |
|
Intra
|
CBX5 | P45973 | NSL1 | Homo sapiens | Q96IY1 | 27705803 | |
|
Intra
|
CBX5 | P45973 | NSL1 | Homo sapiens | Q96IY1 | 20562864 | |
|
Intra
|
CBX5 | P45973 | NSL1 | Homo sapiens | Q96IY1 | 32814053 | |
|
Intra
|
CBX5 | P45973 | NSL1 | Homo sapiens | Q96IY1 | 32814053 | |
|
Intra
|
CBX5 | P45973 | PIGV | Homo sapiens | Q9NUD9 | 32814053 | |
|
Intra
|
CBX5 | P45973 | PIGV | Homo sapiens | Q9NUD9 | 32814053 | |
|
Intra
|
CBX5 | P45973 | PIGV | Homo sapiens | Q9NUD9 | 32814053 | |
|
Intra
|
CBX5 | P45973 | ARFGAP3 | Homo sapiens | Q9NP61 | 32814053 | |
|
Intra
|
CBX5 | P45973 | ARFGAP3 | Homo sapiens | Q9NP61 | 32814053 | |
|
Intra
|
CBX5 | P45973 | ARFGAP3 | Homo sapiens | Q9NP61 | 32814053 | |
|
Intra
|
CBX5 | P45973 | H4C16 | Homo sapiens | P62805 | 24981860 | |
|
Intra
|
CBX5 | P45973 | H4C16 | Homo sapiens | P62805 | 30021884 | |
|
Intra
|
CBX5 | P45973 | H4C16 | Homo sapiens | P62805 | 21888893 | |
|
Intra
|
CBX5 | P45973 | INCENP | Homo sapiens | Q9NQS7 | 20562864 | |
|
Intra
|
CBX5 | P45973 | INCENP | Homo sapiens | Q9NQS7 | 21346195 | |
|
Intra
|
CBX5 | P45973 | NSD3 | Homo sapiens | Q9BZ95 | 21516116 | |
|
Intra
|
CBX5 | P45973 | NSD3 | Homo sapiens | Q9BZ95 | 32814053 | |
|
Intra
|
CBX5 | P45973 | SUV39H1 | Homo sapiens | O43463 | 32814053 | |
|
Intra
|
CBX5 | P45973 | SUV39H1 | Homo sapiens | O43463 | 32814053 | |
|
Intra
|
CBX5 | P45973 | SUV39H1 | Homo sapiens | O43463 | 32296183 | |
|
Intra
|
CBX5 | P45973 | SUV39H1 | Homo sapiens | O43463 | 20562864 | |
|
Intra
|
CBX5 | P45973 | SUV39H1 | Homo sapiens | O43463 | 32814053 | |
|
Intra
|
CBX5 | P45973 | SUV39H1 | Homo sapiens | O43463 | 32296183 | |
|
Intra
|
CBX5 | P45973 | H3-4 | Homo sapiens | Q16695 | 21888893 | |
|
Intra
|
CBX5 | P45973 | ATRX | Homo sapiens | P46100 | 10699177 | |
|
Intra
|
CBX5 | P45973 | MYC | Homo sapiens | P01106 | 32814053 | |
|
Intra
|
CBX5 | P45973 | MYC | Homo sapiens | P01106 | 32814053 | |
|
Intra
|
CBX5 | P45973 | MYC | Homo sapiens | P01106 | 32814053 | |
|
Intra
|
CBX5 | P45973 | LRIF1 | Homo sapiens | Q5T3J3 | 32296183 | |
|
Intra
|
CBX5 | P45973 | LRIF1 | Homo sapiens | Q5T3J3 | 23542155 | |
|
Intra
|
CBX5 | P45973 | LRIF1 | Homo sapiens | Q5T3J3 | 27705803 | |
|
Intra
|
CBX5 | P45973 | LRIF1 | Homo sapiens | Q5T3J3 | 32296183 | |
|
Intra
|
CBX5 | P45973 | LRIF1 | Homo sapiens | Q5T3J3 | 20562864 | |
|
Intra
|
CBX5 | P45973 | LRIF1 | Homo sapiens | Q5T3J3 | 32296183 | |
|
Intra
|
CBX5 | P45973 | SP100 | Homo sapiens | P23497-2 | 27107012 | |
|
Intra
|
CBX5 | P45973 | SP100 | Homo sapiens | P23497-2 | 27107012 | |
|
Intra
|
CBX5 | P45973 | DDX19B | Homo sapiens | Q9UMR2 | 32814053 | |
|
Intra
|
CBX5 | P45973 | DDX19B | Homo sapiens | Q9UMR2 | 32814053 | |
|
Intra
|
CBX5 | P45973 | DDX19B | Homo sapiens | Q9UMR2 | 32814053 | |
|
Intra
|
CBX5 | P45973 | PRR14 | Homo sapiens | Q9BWN1 | 32296183 | |
|
Intra
|
CBX5 | P45973 | PRR14 | Homo sapiens | Q9BWN1 | 20562864 | |
|
Intra
|
CBX5 | P45973 | PRR14 | Homo sapiens | Q9BWN1 | 27705803 | |
|
Intra
|
CBX5 | P45973 | PRR14 | Homo sapiens | Q9BWN1 | 31515488 | |
|
Intra
|
CBX5 | P45973 | PRR14 | Homo sapiens | Q9BWN1 | 16189514 | |
|
Intra
|
CBX5 | P45973 | PRR14 | Homo sapiens | Q9BWN1 | 32296183 | |
|
Intra
|
CBX5 | P45973 | PRR14 | Homo sapiens | Q9BWN1 | 32296183 | |
|
Intra
|
CBX5 | P45973 | TRAF3IP3 | Homo sapiens | Q9Y228 | 32814053 | |
|
Intra
|
CBX5 | P45973 | TRAF3IP3 | Homo sapiens | Q9Y228 | 32814053 | |
|
Intra
|
CBX5 | P45973 | TRAF3IP3 | Homo sapiens | Q9Y228 | 32814053 | |
|
Intra
|
CBX5 | P45973 | SENP7 | Homo sapiens | Q9BQF6 | 20562864 | |
|
Intra
|
CBX5 | P45973 | SENP7 | Homo sapiens | Q9BQF6 | 27705803 | |
|
Intra
|
CBX5 | P45973 | TRIM28 | Homo sapiens | Q13263 | 24981860 | |
|
Intra
|
CBX5 | P45973 | TRIM28 | Homo sapiens | Q13263 | 27705803 | |
|
Intra
|
CBX5 | P45973 | TRIM28 | Homo sapiens | Q13263 | 21888893 | |
|
Intra
|
CBX5 | P45973 | TRIM28 | Homo sapiens | Q13263 | 20562864 | |
|
Intra
|
CBX5 | P45973 | TRIM28 | Homo sapiens | Q13263 | 19498464 | |
|
Intra
|
CBX5 | P45973 | PPARA | Homo sapiens | Q07869 | 32814053 | |
|
Intra
|
CBX5 | P45973 | PPARA | Homo sapiens | Q07869 | 32814053 | |
|
Intra
|
CBX5 | P45973 | PPARA | Homo sapiens | Q07869 | 32814053 | |
|
Intra
|
CBX5 | P45973 | H3C1 | Homo sapiens | P68431 | 16415788 | |
|
Intra
|
CBX5 | P45973 | H3C1 | Homo sapiens | P68431 | 20871592 | |
|
Intra
|
CBX5 | P45973 | MBD1 | Homo sapiens | Q9UIS9 | 12711603 | |
|
Intra
|
CBX5 | P45973 | MBD1 | Homo sapiens | Q9UIS9 | 12711603 | |
|
Intra
|
CBX5 | P45973 | MBD1 | Homo sapiens | Q9UIS9 | 12711603 | |
|
Intra
|
CBX5 | P45973 | ZNF280C | Homo sapiens | Q8ND82 | 32296183 | |
|
Cross
|
CBX5 | P45973 | legAS4 | Legionella pneumophila subsp. pneumophila | Q5ZUS4 | 23797873 | |
|
Cross
|
CBX5 | P45973 | legAS4 | Legionella pneumophila subsp. pneumophila | Q5ZUS4 | 23797873 | |
|
Intra
|
CBX5 | P45973 | CSNK1D | Homo sapiens | P48730-2 | 32814053 | |
|
Intra
|
CBX5 | P45973 | CSNK1D | Homo sapiens | P48730-2 | 32814053 | |
|
Intra
|
CBX5 | P45973 | CSNK1D | Homo sapiens | P48730-2 | 32814053 | |
|
Intra
|
CBX5 | P45973 | SGO1 | Homo sapiens | Q5FBB7 | 24981860 | |
|
Intra
|
CBX5 | P45973 | SGO1 | Homo sapiens | Q5FBB7 | 20562864 |
CBX5 Antibodies
| Cat. No. | Product Name | Application | Reactivity |
|---|---|---|---|
| HY-P81280 | HP1 alpha Antibody (YA981) | WB, IHC-F, IHC-P, ICC/IF | Human, Mouse, Rat |
| HY-P81280A | HP1 alpha Antibody (YA982) | WB, IHC-P | Human, Rat, Mouse |
| HY-P81280AA | HP1 alpha Antibody (YA982)(PBS only) | WB, IHC-P | Human, Rat, Mouse |
| HY-P81280B | HP1 alpha Antibody (YA983) | WB, IHC-F, IHC-P, ICC/IF, IP | Human, Mouse, Rat |
| HY-P81280BA | HP1 alpha Antibody (YA983)(PBS only) | WB, IHC-F, IHC-P, ICC/IF, IP | Human, Mouse, Rat |
| HY-P84335 | HP1 alpha Antibody (YA4032) | WB, ICC/IF, FC, ELISA | Human, Mouse |
| HY-P84335A | HP1 alpha Antibody (YA4032)(PBS only) | WB, ICC/IF, FC, ELISA | Human, Mouse |
| HY-P84336 | HP1 alpha Antibody (YA4033) | WB, IHC-P, ICC/IF, ELISA | Human, Mouse |
| HY-P84336A | HP1 alpha Antibody (YA4033)(PBS only) | WB, IHC-P, ICC/IF, ELISA | Human, Mouse |
| HY-P85436 | HP1 alpha Antibody (YA5128) | WB, ICC/IF | Human, Mouse, Rat, Bovine, Dog, Pig |
| HY-P85773 | HP1 alpha Antibody (YA5465) | ICC/IF, WB, IHC-P | Human, Mouse, Rat |
| HY-P86483 | HP1 alpha Antibody (YA6175) | WB, IHC-P, ICC/IF, IP, ELISA | Human, Mouse, Rat |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Reynolds Syndrome |
|
|
| Hutchinson-Gilford Progeria Syndrome |
|
|
| Immunodeficiency-Centromeric Instability-Facial Anomalies Syndrome |
|
|
| Hyperoxaluria, Primary, Type I |
|
|
| Primary Hyperoxaluria |
|
|
| Alpha Thalassemia-X-Linked Intellectual Disability Syndrome |
|
|
| White-Sutton Syndrome |
|
|
| Alpha-Thalassemia |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Macaca mulatta | CBX5 | VGNC | VGNC:70559 |
| Rattus norvegicus | CBX5 | RGD | RGD:1306619 |
| Bos taurus | CBX5 | VGNC | VGNC:26818 |
| Canis familiaris | CBX5 | VGNC | VGNC:38767 |
| Mus musculus | CBX5 | MGD | MGI:109372 |
| Others | CBX5 | NCBI |