WDR4 - WD repeat domain 4 Gene
Also Known as hWH; Wuho; MIGSB; TRM82; GAMOS6; TRMT82
Species: Homo sapiens
About WDR4
This gene has 7 transcripts (splice variants), 189 orthologues and is associated with 4 phenotypes. Ubiquitous expression in lymph node (RPKM 3.3), appendix (RPKM 3.2) and 25 other tissues.
Summary
This gene encodes a member of the WD repeat protein family. WD repeats are minimally conserved regions of approximately 40 Amino acids typically bracketed by gly-his and trp-asp (GH-WD), which may facilitate formation of heterotrimeric or multiprotein complexes. Members of this family are involved in a variety of cellular processes, including cell cycle progression, signal transduction, Apoptosis, and gene regulation. This gene is excluded as a candidate for a form of nonsyndromic deafness (DFNB10), but is still a candidate for Other disorders mapped to 21q22.3 as well as for the development of Down syndrome phenotypes. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, May 2012]
WDR4 Products (6)
| mRNA | Protein | Name |
|---|---|---|
| NM_001260474.2 | NP_001247403.1 | tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 isoform 2 |
| NM_001260475.2 | NP_001247404.1 | tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 isoform 3 |
| NM_001260476.2 | NP_001247405.1 | tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 isoform 3 |
| NM_001260477.2 | NP_001247406.1 | tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 isoform 3 |
| NM_018669.6 | NP_061139.2 | tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 isoform 1 |
| NM_033661.5 | NP_387510.1 | tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 isoform 1 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables enzyme activator activity |
IDA
IDA: Inferred from direct assay
|
36599982 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
15861136 | GOA |
| enables tRNA methyltransferase activator activity |
IDA
IDA: Inferred from direct assay
|
36599982 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in tRNA (guanine-N7)-methylation |
IDA
IDA: Inferred from direct assay
|
36599982 | GOA |
| involved in tRNA modification |
IDA
IDA: Inferred from direct assay
|
15861136 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
15861136 | GOA |
| part of tRNA (m7G46) methyltransferase complex |
IDA
IDA: Inferred from direct assay
|
36599982 | GOA |
| part of tRNA methyltransferase complex |
IDA
IDA: Inferred from direct assay
|
12403464 | GOA |
WDR4 Protein Structure
WD40: WD domain, G-beta repeat (143 - 171)
WD40: WD domain, G-beta repeat (185 - 217)
- 0
- 100
- 200
- 300
- 412 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 |
|
WDR4 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
WDR4 | P57081 | RABGGTB | Homo sapiens | P53611 | 25416956 | |
|
Intra
|
WDR4 | P57081 | RABGGTB | Homo sapiens | P53611 | 32296183 | |
|
Intra
|
WDR4 | P57081 | RABGGTB | Homo sapiens | P53611 | 25416956 | |
|
Intra
|
WDR4 | P57081 | RABGGTB | Homo sapiens | P53611 | 32296183 | |
|
Intra
|
WDR4 | P57081 | FEN1 | Homo sapiens | P39748 | 26751069 | |
|
Intra
|
WDR4 | P57081 | FEN1 | Homo sapiens | P39748 | 26751069 | |
|
Intra
|
WDR4 | P57081 | FEN1 | Homo sapiens | P39748 | 26751069 | |
|
Intra
|
WDR4 | P57081 | FEN1 | Homo sapiens | P39748 | 26751069 | |
|
Intra
|
WDR4 | P57081 | METTL1 | Homo sapiens | Q9UBP6 | 32296183 | |
|
Intra
|
WDR4 | P57081 | METTL1 | Homo sapiens | Q9UBP6 | 25416956 | |
|
Intra
|
WDR4 | P57081 | METTL1 | Homo sapiens | Q9UBP6 | 32296183 | |
|
Intra
|
WDR4 | P57081 | METTL1 | Homo sapiens | Q9UBP6 | 25416956 | |
|
Intra
|
WDR4 | P57081 | METTL1 | Homo sapiens | Q9UBP6 | 32296183 | |
|
Intra
|
WDR4 | P57081 | METTL1 | Homo sapiens | Q9UBP6 | 33961781 | |
|
Intra
|
WDR4 | P57081 | METTL1 | Homo sapiens | Q9UBP6 | 26751069 | |
|
Intra
|
WDR4 | P57081 | FAM118A | Homo sapiens | Q9NWS6 | 25416956 | |
|
Intra
|
WDR4 | P57081 | FAM118A | Homo sapiens | Q9NWS6 | 32296183 | |
|
Intra
|
WDR4 | P57081 | FAM118A | Homo sapiens | Q9NWS6 | 32296183 | |
|
Intra
|
WDR4 | P57081 | FAM118A | Homo sapiens | Q9NWS6 | 25416956 | |
|
Intra
|
WDR4 | P57081 | FAM118A | Homo sapiens | Q9NWS6 | 32296183 |
WDR4 Antibodies
| Cat. No. | Product Name | Application | Reactivity |
|---|---|---|---|
| HY-P83179 | WDR4 Antibody (YA2924) | WB, IHC-P, ICC/IF, FC | Human |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Microcephaly, Growth Deficiency, Seizures, And Brain Malformations |
|
|
| Galloway-Mowat Syndrome 6 |
|
|
| Galloway-Mowat Syndrome |
|
|
| Galloway-Mowat Syndrome 1 |
|
|
| Seckel Syndrome |
|
|
| Lissencephaly |
|
|
| Isolated Growth Hormone Deficiency, Type Ia |
|
|
| Polymicrogyria |
|
|
| Microcephaly |
|
|
| Non-Syndromic X-Linked Intellectual Disability |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Macaca mulatta | WDR4 | VGNC | VGNC:81794 |
| Bos taurus | WDR4 | VGNC | VGNC:36897 |
| Rattus norvegicus | WDR4 | RGD | RGD:1585179 |
| Canis familiaris | WDR4 | VGNC | VGNC:48365 |
| Mus musculus | WDR4 | MGD | MGI:1889002 |
| Felis catus | WDR4 | VGNC | VGNC:67031 |
| Others | WDR4 | NCBI |