RMR-Tre
RMR-Tre is a fluorescent probe targeting the mycobacterial acyltransferase Ag85. Under the catalysis of Ag85, RMR-Tre undergoes 6-position mycoloylation and anchors to the mycobacterial membrane, while achieving fluorescence activation by inhibiting the intramolecular twisted charge transfer state transition. RMR-Tre can distinguish live mycobacteria from dead ones through metabolism-driven labeling, enabling rapid, wash-free, low-background detection of viable bacteria. RMR-Tre reports the drug resistance of Mycobacterium tuberculosis via the trehalose catalytic shift activity readout associated with TreS. In addition, RMR-Tre can be combined with flow cytometry or high-content imaging techniques to visualize and quantitatively analyze the metabolic heterogeneity of Mycobacterium tuberculosis related to persistence and drug resistance. RMR-Tre is widely used in tuberculosis-related research.
For research use only. We do not sell to patients.
- Formula: C32H38N4O11S
- Molecular Weight:686.73
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Storage:
Please store the product under the recommended conditions in the Certificate of Analysis.
Biological Activity
Description
In Vitro
RMR-Tre (1 μM-1 mM; 5 min-16 h) rapidly and efficiently labels live M. smegmatis in a time- and concentration-dependent manner without inhibiting bacterial growth, achieving >2000-fold fluorescence enhancement at 100 μM for 4 h[1].
RMR-Tre (100 μM; 4 h) specifically labels live M. smegmatis via metabolically driven incorporation, enabling discrimination between live and dead M. smegmatis[1].
RMR-Tre (100 μM; 30 min-4 h) incorporation into live M. smegmatis is primarily mediated by Ag85 mycoloyltransferase activity, as demonstrated by inhibition with Ebselen (HY-13750) and reduced labeling in Ag85-deficient mutant cells[1].
RMR-Tre (100 μM; 4 h) exhibits high specificity for mycomembrane-containing bacterial species, efficiently labeling M. smegmatis and Corynebacterium glutamicum but not mycomembrane-deficient Escherichia coli or Bacillus subtilis[1].
RMR-Tre (100 μM; 10 min-60 min) enables no-wash, rapid fluorescence microscopy labeling of live M. smegmatis, producing bright, localized fluorescence with low background as early as 10 min post-incubation[1].
RMR-Tre enables visualization and quantification of metabolic heterogeneity linked to persistence and drug resistance in Mycobacterium tuberculosis, with high-label cell subpopulations correlating with elevated TreS activity, persister physiology, and enhanced antibiotic survival, and drug-resistant strains showing a larger baseline fraction of high-label cells[2].
MedChemExpress (MCE) has not independently confirmed the accuracy of these methods. They are for reference only. Further protocols information, click here.
Chemical Information
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Molecular Weight 686.73
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Formula C32H38N4O11S
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SMILES
O[C@H]1[C@H](O)[C@@H](O)[C@@H](O[C@@H]2[C@H](O)[C@@H](O)[C@H](O)[C@@H](CNC(CCN3C4=C(C=C(C=C4)C5=CC=C(/C=C(C#N)/C#N)S5)CCC3)=O)O2)O[C@@H]1CO
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Shipping
Room temperature in continental US; may vary elsewhere.
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Storage
Please store the product under the recommended conditions in the Certificate of Analysis.
Protocols
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Flow Cytometry
Flow cytometry (FC) is a technique for high-speed, step-by-step quantitative analysis and sorting of single cells or other biological particles in a suspension by detecting labeled fluorescent signals.
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Flow cytometric DNA-content cell-cycle staining
Flow cytometric DNA-content cell-cycle staining measures the fluorescence intensity of DNA-bound fluorochromes in single cells or nuclei to estimate DNA content distributions, allowing assignment of populations to G0/G1, S, and G2/M phases by DNA histogram deconvolution. Propidium iodide (PI) intercalates into DNA, and PI fluorescence is proportional to cellular DNA content when staining is performed under conditions that make DNA accessible and minimize non-DNA signal. Cells with G2/M DNA content are expected to show approximately twice the fluorescence intensity of G0/G1 cells, while S-phase cells occupy intermediate fluorescence values. PI-based DNA-content analysis can also detect cells with fractional DNA content, often reported as sub-G1, when DNA fragmentation and extraction during staining reduce retained DNA signal in apoptotic cells. DAPI is an alternative DNA fluorochrome for univariate DNA-content analysis, while bivariate approaches combining DNA content with proliferation
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Protocol for Phospho-flow cytometry
Phospho-flow cytometry detects intracellular phosphorylated signaling proteins in single cells using phospho-specific antibodies after rapid fixation and permeabilization; the fluorescence intensity reflects phosphorylation state and therefore kinase-pathway activation, inhibition, or drug response in defined cell subsets. Unlike Western blot, phospho-flow preserves single-cell resolution and can measure signaling heterogeneity in cancer cells, primary immune cells, dissociated mouse tumors, macrophages, organoid-derived cells, and drug-screening samples when validated antibodies and fixation/permeabilization conditions are used.
Purity & Documentation
References
Calculators
Concentration (start) × Volume (start) = Concentration (final) × Volume (final)