Nlrp1a - NLR family, pyrin domain containing 1A Gene
Also Known as Nalp1; Nlrp1
Species: Rattus norvegicus
About Nlrp1a
This gene has 4 transcripts (splice variants), 87 orthologues, 21 paralogues and is associated with 5 phenotypes. Biased expression in Thymus (RPKM 161.4), Spleen (RPKM 147.) and 8 other tissues.
Summary
Enables scaffold protein binding activity. Involved in negative regulation of cellular defense response and positive regulation of Pyroptosis. Located in neuronal cell body. Part of protein-containing complex. Human ortholog(s) of this gene implicated in vitiligo. Orthologous to human NLRP1 (NLR family pyrin domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Nlrp1a Products (1)
| mRNA | Protein | Name |
|---|---|---|
| NM_001145755.2 | NP_001139227.2 | NACHT, LRR and PYD domains-containing protein 1a allele 1 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
19416975 | RGD |
| enables scaffold protein binding |
IPI
IPI: Inferred from physical interaction
|
19416975 | RGD |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in negative regulation of cellular defense response |
IMP
IMP: Inferred from mutant phenotype
|
24626226 | RGD |
| involved in positive regulation of pyroptotic inflammatory response |
IMP
IMP: Inferred from mutant phenotype
|
24626226 | RGD |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in neuronal cell body |
IDA
IDA: Inferred from direct assay
|
19401709 | RGD |
| part of protein-containing complex |
IDA
IDA: Inferred from direct assay
|
19416975 | RGD |
Nlrp1a Protein Structure
NACHT: pfam05729 (174 - 343)
NOD2_WH: cl39286 (413 - 467)
NLRC4_HD2: pfam17776 (469 - 580)
PPP1R42: cl42388 (663 - 784)
LRR_RI: sd00033 (673 - 694)
LRR_RI: sd00033 (702 - 729)
LRR_RI: sd00033 (730 - 758)
LRR_RI: sd00033 (759 - 779)
FIIND: pfam13553 (855 - 1107)
CARD_ASC_NALP1: cd08330 (1127 - 1207)
- 0
- 200
- 400
- 600
- 800
- 1000
- 1218 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
NACHT, LRR and PYD domains-containing protein 1a allele 1 NACHT, LRR and PYD domains-containing protein 1 |
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