PSMB6 - proteasome 20S subunit beta 6 Gene
Also Known as LMPY; DELTA
生物種: Homo sapiens
About PSMB6
This gene has 5 transcripts (splice variants), 212 orthologues and 18 paralogues. Ubiquitous expression in placenta (RPKM 53.0), heart (RPKM 51.7) and 25 other tissues.
Summary
The Proteasome is a multicatalytic proteinase complex with a highly ordered ring-shaped 20S core structure. The core structure is composed of 4 rings of 28 non-identical subunits; 2 rings are composed of 7 alpha subunits and 2 rings are composed of 7 beta subunits. Proteasomes are distributed throughout eukaryotic cells at a high concentration and cleave peptides in an ATP/ubiquitin-dependent process in a non-lysosomal pathway. The encoded protein is a member of the Proteasome B-type family, also known as the T1B family, and is a 20S core beta subunit in the Proteasome. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Jul 2012]
PSMB6 Products (2)
| mRNA | Protein | Name |
|---|---|---|
| NM_001270481.2 | NP_001257410.1 | proteasome subunit beta type-6 isoform 2 |
| NM_002798.3 | NP_002789.1 | proteasome subunit beta type-6 isoform 1 |
| Molecular Function GO Annotation | Evidence | 参考文献 | 由来 |
|---|---|---|---|
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
14733938 | GOA |
| Cellular Component GO Annotation | Evidence | 参考文献 | 由来 |
|---|---|---|---|
| is active in cytoplasm |
IDA
IDA: Inferred from direct assay
|
34711951 | GOA |
| is active in nucleus |
IDA
IDA: Inferred from direct assay
|
34711951 | GOA |
| part of proteasome complex |
IDA
IDA: Inferred from direct assay
|
17323924 | GOA |
| part of proteasome core complex |
IDA
IDA: Inferred from direct assay
|
34711951 | GOA |
PSMB6 Protein Structure
Proteasome: Proteasome subunit (31 - 212)
- 0
- 100
- 200
- 239 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
proteasome subunit beta type-6 |
|
PSMB6 Protein-protein interaction Information
|
Type
|
タンパク質名 | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | 参考文献 |
|---|---|---|---|---|---|---|---|
|
Intra
|
PSMB6 | P28072 | NDOR1 | Homo sapiens | Q9UHB4 | 32296183 | |
|
Intra
|
PSMB6 | P28072 | HTT | Homo sapiens | P42858 | 32814053 | |
|
Intra
|
PSMB6 | P28072 | HTT | Homo sapiens | P42858 | 32814053 | |
|
Intra
|
PSMB6 | P28072 | HTT | Homo sapiens | P42858 | 32814053 | |
|
Intra
|
PSMB6 | P28072 | POMP | Homo sapiens | Q9Y244 | 35271311 | |
|
Intra
|
PSMB6 | P28072 | POMP | Homo sapiens | Q9Y244 | 14733938 |
Orthologs Information
| 生物種 | Symbol | 由来 | ID |
|---|---|---|---|
| Felis catus | PSMB6 | VGNC | VGNC:99326 |
| Rattus norvegicus | PSMB6 | RGD | RGD:61881 |
| Bos taurus | PSMB6 | VGNC | VGNC:33450 |
| Canis familiaris | PSMB6 | VGNC | VGNC:45098 |
| Mus musculus | PSMB6 | MGD | MGI:104880 |
| Macaca mulatta | PSMB6 | VGNC | VGNC:104644 |
| Others | PSMB6 | NCBI |