1. Cell Cycle/DNA Damage Epigenetics Apoptosis
  2. HDAC Apoptosis
  3. HDAC-IN-53

HDAC-IN-53 is an orally active, and selective HDAC1-3 inhibitor with IC50 values of 47 nM, 125 nM, and 450 nM, respectively. HDAC-IN-53 does not inhibit class II HDACs (HDAC4, 5, 6, 7, 9; IC50>10 μM). HDAC-IN-53 induces caspase-dependent apoptosis. HDAC-IN-53 significantly inhibits the growth of human tumor xenografts in nude mice and murine tumor growth in immune-competent mice bearing MC38 colon cancer.

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HDAC-IN-53 Chemical Structure

HDAC-IN-53 Chemical Structure

CAS No. : 2921948-27-6

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Description

HDAC-IN-53 is an orally active, and selective HDAC1-3 inhibitor with IC50 values of 47 nM, 125 nM, and 450 nM, respectively. HDAC-IN-53 does not inhibit class II HDACs (HDAC4, 5, 6, 7, 9; IC50>10 μM). HDAC-IN-53 induces caspase-dependent apoptosis. HDAC-IN-53 significantly inhibits the growth of human tumor xenografts in nude mice and murine tumor growth in immune-competent mice bearing MC38 colon cancer[1].

IC50 & Target[1]

HDAC1

47 nM (IC50)

HDAC2

125 nM (IC50)

HDAC3

450 nM (IC50)

HDAC4

>10 μM (IC50)

HDAC5

>10 μM (IC50)

HDAC6

>10 μM (IC50)

HDAC7

>10 μM (IC50)

HDAC8

>10 μM (IC50)

HDAC9

>10 μM (IC50)

In Vitro

HDAC-IN-53 (compound 19h) has good antiproliferative activity against a panel of cancer cell lines, for example MC38 (IC50=0.66 μM), HCT116 cell (IC50=0.56 μM) [1].
HDAC-IN-53 (0.1-1 μM; 24 h) causes G0/G1 cell cycle arrest in MC38 cells and induces G2/M cell cycle arrest in HCT116 cells[1].
HDAC-IN-53 (0.1-1 μM; 24 h) upregulates the expressions of cleaved caspase-3 and cleaved PARP in a dose-dependent manner[1].

MedChemExpress (MCE) has not independently confirmed the accuracy of these methods. They are for reference only.

Cell Cycle Analysis[1]

Cell Line: MC38 and HCT116 cells
Concentration: 0.1, 0.3, 1 μM
Incubation Time: 24 h
Result: Caused G0/G1 cell cycle arrest in MC38 cells and induced G2/M cell cycle arrest in HCT116 cells.
Significantly decreased the proportion of S phase cells in MC38 cells.

Western Blot Analysis[1]

Cell Line: MC38 and HCT116 cells
Concentration: 0.1, 0.3, 1 μM
Incubation Time: 24 h
Result: Upregulated the expressions of cleaved caspase-3 and cleaved PARP in a dose-dependent manner.
In Vivo

HDAC-IN-53 (60 or 120 mg/kg; PO; daily for 15 days) exerts antitumor activities by both direct tumor growth inhibition and indirect immune cell-mediated antitumor effect[1].
Pharmacokinetic Parameters of HDAC-IN-53 in Mice[1].

IV (5 mg/kg) PO (20 mg/kg)
Tmax (h) 0.42
Cmax (ng/mL) 8129 9558
AUC0-t (ng/mL∗h) 5864 15278
t1/2 (h) 0.85 2.49
F (%) 65.1%

MedChemExpress (MCE) has not independently confirmed the accuracy of these methods. They are for reference only.

Animal Model: C57BL/6 Mice or athymic nude mice (female, 6-8 weeks old) with MC38 cells[1]
Dosage: 60 or 120 mg/kg
Administration: PO; daily for 15 days
Result: Yielded TGI values of 60.3 and 87.6%, respectively.
Increased the percentage of CD4+ T cells.
Molecular Weight

461.90

Formula

C23H20ClN7O2

CAS No.
SMILES

NC1=NN(C2=CC=CC=C2Cl)N=C1C(NCC3=CC=C(C=C3)C(NC4=CC=CC=C4N)=O)=O

Shipping

Room temperature in continental US; may vary elsewhere.

Storage

Please store the product under the recommended conditions in the Certificate of Analysis.

Purity & Documentation
References
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HDAC-IN-53 Related Classifications

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Help & FAQs
  • Do most proteins show cross-species activity?

    Species cross-reactivity must be investigated individually for each product. Many human cytokines will produce a nice response in mouse cell lines, and many mouse proteins will show activity on human cells. Other proteins may have a lower specific activity when used in the opposite species.

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HDAC-IN-53
Cat. No.:
HY-149208
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