Scaffold-Hopping Approach To Discover Potent, Selective, and Efficacious Inhibitors of NF-κB Inducing Kinase

  • J Med Chem. 2018 Aug 9;61(15):6801-6813. doi: 10.1021/acs.jmedchem.8b00678.
Nicole Blaquiere  1 Georgette M Castanedo  1 Jason D Burch  1 Leonid M Berezhkovskiy  1 Hans Brightbill  1 Suzanne Brown  1 Connie Chan  1 Po-Chang Chiang  1 James J Crawford  1 Teresa Dong  1 Peter Fan  1 Jianwen Feng  1 Nico Ghilardi  1 Robert Godemann  2 Emily Gogol  1 Alice Grabbe  2 Alison J Hole  2 Baihua Hu  3 Sarah G Hymowitz  1 Moulay Hicham Alaoui Ismaili  1 Hoa Le  1 Patrick Lee  1 Wyne Lee  1 Xingyu Lin  3 Ning Liu  1 Paul A McEwan  2 Brent McKenzie  1 Hernani L Silvestre  2 Eric Suto  1 Swathi Sujatha-Bhaskar  1 Guosheng Wu  3 Lawren C Wu  1 Yamin Zhang  3 Zoe Zhong  1 Steven T Staben  1
Affiliations
  • 1. Genentech, Inc. , 1 DNA Way , South San Francisco , California 94080 , United States.
  • 2. Evotec AG , Manfred Eigen Campus, Essener Bogen , Hamburg 22419 , Germany.
  • 3. Pharmaron Beijing Co., Ltd. , 6 Taihe Road, BDA , Beijing 100176 , P. R. China.
Abstract

NF-κB-inducing kinase (NIK) is a protein kinase central to the noncanonical NF-κB pathway downstream from multiple TNF Receptor family members, including BAFF, which has been associated with B cell survival and maturation, dendritic cell activation, secondary lymphoid organ development, and bone metabolism. We report herein the discovery of lead chemical series of NIK inhibitors that were identified through a scaffold-hopping strategy using structure-based design. Electronic and steric properties of lead compounds were modified to address glutathione conjugation and amide hydrolysis. These highly potent compounds exhibited selective inhibition of LTβR-dependent p52 translocation and transcription of NF-κB2 related genes. Compound 4f is shown to have a favorable pharmacokinetic profile across species and to inhibit BAFF-induced B cell survival in vitro and reduce splenic marginal zone B cells in vivo.

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