CL-NC
CL-NC is a chemiluminescent probe used for in vivo imaging of N-methyl-D-aspartate receptors (NMDARs), and its detection mechanism relies on bioorthogonal activation achieved via a tetrazine-triggered click-to-release reaction. The isonitrile group of CL-NC undergoes a click reaction with tetrazine, followed by hydrolysis and β-elimination to release a phenoxide anion, which induces the departure of adamantane and generates chemiluminescence. CL-NC has a maximum absorption wavelength of approximately 425 nm, a maximum fluorescence emission wavelength of approximately 670 nm, and a maximum chemiluminescence emission wavelength of 710 nm. When used in combination with Tz-IFDL (HY-D3369), an NMDAR ligand conjugated with tetrazine, CL-NC enables targeted imaging of NMDARs in living cells, as well as in the brain and spinal cord of living mice.
For research use only. We do not sell to patients.
- CAS No.: 3114128-41-2
- Formula: C36H33N3O5
- Molecular Weight:587.66
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Storage:
Please store the product under the recommended conditions in the Certificate of Analysis.
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Biological Activity
Description
IC50 & Target
[1]|
NMDA Receptor |
In Vitro
Guide
(The following is our recommended protocol. This protocol is for guidance only and should be modified according to your specific needs).
1. Stock Solution Preparation
1.1 Solvent: DMSO/PBS buffer.
1.2 Concentration recommendation: 1 mM.
2. Working Solution Preparation
2.1 Diluent: PBS buffer with DMSO.
2.2 Working concentration: 50 µM; 100 µM.
2.3 Note: Adjust working solution concentration as needed; prepare fresh before use.
3. Staining Procedure
3.1 Sample type:[1]
3.1.1 Adherent cells: HT22, Bend.3, HEK293, AML-12, H9C2, HeLa cells.
3.1.2 In vivo samples: Murine intracerebral and intraspinal tissues.
3.2 Incubation conditions:
3.2.1 Incubate adherent cells with Tz-IFDL (HY-D3369) (50 µM) at 37°C for 30 min.
3.2.2 After washing, incubate adherent cells with CL-NC (50 µM) at 37°C for 3 h.
3.2.3 For in vivo imaging, administer Tz-IFDL via intracranial/intrathecal injection 1 h prior to CL-NC injection.
3.3 Washing steps:
3.3.1 Wash adherent cells with PBS buffer after Tz-IFDL incubation.
4. Controls
4.1 Negative controls:
4.1.1 Adherent cells: NR2B-knockdown cells, NR2B-null cell lines, cells treated with Pre-NC instead of CL-NC, cells treated with Tz-IFDL plus competitive Ifenprodil (HY-12882).
4.1.2 In vivo: Mice treated with tetrazine-free compound followed by CL-NC; mice treated with Tz-Br followed by CL-NC; mice pre-injected with Ifenprodil before probe administration.
4.2 Positive control validates experimental system; blank control excludes reagent fluorescence interference.
5. Detection & Analysis
5.1 Instrument: Chemiluminescence imaging system
5.1.1 Emission wavelength: 710 nm.
5.2 Result analysis:
5.2.1 Fluorescence intensity changes: OFF-ON chemiluminescence signal triggered by bioorthogonal reaction between CL-NC and tetrazine-conjugated ligand; peak intensity at ~3.5 h for CL-NC/Tz-Br system, ~3 h for in vivo imaging; half-life of 13.4 h for CL-NC/Tz-Br system, 8 h for CL-NC/Tz-IFDL system.
5.2.2 Fluorescence localization: Intracerebral and intraspinal regions in mice; cell surface of NR2B-expressing cells.
5.2.3 Color changes: Deep-red/near-infrared chemiluminescence.
5.2.4 The chemiluminescence intensity of wild-type mice was higher than that of Alzheimer's disease model mice (reflecting a decrease in NMDAR expression levels); higher intensity is observed in NR2B-expressing cells compared to NR2B-null/knockdown cells.
MedChemExpress (MCE) has not independently confirmed the accuracy of these methods. They are for reference only.
Chemical Information
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CAS No. 3114128-41-2
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Molecular Weight 587.66
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Formula C36H33N3O5
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SMILES
COC1(C2([C@@H]3C[C@H]4C[C@H](C[C@@H]2C4)C3)OO1)C5=CC(OCCC[N+]#[C-])=CC=C5/C=C/C6=C/C(C(C=CC=C7)=C7O6)=C(C#N)/C#N
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Shipping
Room temperature in continental US; may vary elsewhere.
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Storage
Please store the product under the recommended conditions in the Certificate of Analysis.
Purity & Documentation
References
Calculators
Concentration (start) × Volume (start) = Concentration (final) × Volume (final)