DDX54 - DEAD-box helicase 54 Gene
Also Known as DP97
Species: Homo sapiens
About DDX54
This gene has 10 transcripts (splice variants), 214 orthologues, 38 paralogues and is associated with 1 phenotype. Ubiquitous expression in kidney (RPKM 11.3), spleen (RPKM 9.8) and 25 other tissues.
Summary
This gene encodes a member of the DEAD box protein family. DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. The nucleolar protein encoded by this gene interacts in a hormone-dependent manner with nuclear receptors, and represses their transcriptional activity. Alternative splice variants that encode different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
DDX54 Products (2)
| mRNA | Protein | Name |
|---|---|---|
| NM_001111322.2 | NP_001104792.1 | ATP-dependent RNA helicase DDX54 isoform 1 |
| NM_024072.4 | NP_076977.3 | ATP-dependent RNA helicase DDX54 isoform 2 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables RNA helicase activity |
IDA
IDA: Inferred from direct assay
|
12466272 | GOA |
| enables nuclear estrogen receptor binding |
IDA
IDA: Inferred from direct assay
|
12466272 | GOA |
| enables signaling receptor binding |
IDA
IDA: Inferred from direct assay
|
12466272 | GOA |
| enables transcription corepressor activity |
IDA
IDA: Inferred from direct assay
|
12466272 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in RNA metabolic process |
IDA
IDA: Inferred from direct assay
|
12466272 | GOA |
| involved in RNA processing |
IDA
IDA: Inferred from direct assay
|
12466272 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in nucleolus |
IDA
IDA: Inferred from direct assay
|
12466272 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
12466272 | GOA |
DDX54 Protein Structure
DEAD: DEAD/DEAH box helicase (120 - 283)
Helicase_C: Helicase conserved C-terminal domain (357 - 433)
DBP10CT: DBP10CT (NUC160) domain (714 - 774)
- 0
- 200
- 400
- 600
- 800
- 881 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
ATP-dependent RNA helicase DDX54 |
|
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Renal Hypoplasia |
|
|
| Febrile Seizures, Familial, 6 |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Felis catus | DDX54 | VGNC | VGNC:61415 |
| Mus musculus | DDX54 | MGD | MGI:1919240 |
| Canis familiaris | DDX54 | VGNC | VGNC:58299 |
| Bos taurus | DDX54 | VGNC | VGNC:27976 |
| Macaca mulatta | DDX54 | VGNC | VGNC:71680 |
| Rattus norvegicus | DDX54 | RGD | RGD:1562539 |
| Others | DDX54 | NCBI |