1. Others Epigenetics Cell Cycle/DNA Damage
  2. Fluorescent Dye HDAC
  3. HDAC-IN-101

HDAC-IN-101 (compound H6M) is a HDAC1 inhibitor and NTR/pH-activated fluorescent inducer, with an IC50 of 65 nM against human HDAC1. HDAC-IN-101 blocks cancer cell proliferation by inhibiting HDAC1. HDAC-IN-101 is reduced by overexpressed nitroreductase to generate H6AQ, a product that emits fluorescence under low pH conditions. HDAC-IN-101 is applicable for cancer-related research.

For research use only. We do not sell to patients.

HDAC-IN-101

HDAC-IN-101 Chemical Structure

CAS No. : 1616863-09-2

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Description

HDAC-IN-101 (compound H6M) is a HDAC1 inhibitor and NTR/pH-activated fluorescent inducer, with an IC50 of 65 nM against human HDAC1. HDAC-IN-101 blocks cancer cell proliferation by inhibiting HDAC1. HDAC-IN-101 is reduced by overexpressed nitroreductase to generate H6AQ, a product that emits fluorescence under low pH conditions. HDAC-IN-101 is applicable for cancer-related research[1].

In Vitro

HDAC-IN-101 (compound H6M) potently inhibits purified HDAC1 enzyme with an IC50 of 65 nM[1].
HDAC-IN-101 (H6M) (72 h) inhibits the proliferation of HeLa, HepG2, HCT116, and H1299 cancer cells with IC50 values of 3.59, 3.55, 3.23, and 2.57 μM, respectively, and shows lower cytotoxicity to normal LO2 cells with an IC50 of 12.98 μM following 72 h of incubation[1].
HDAC-IN-101 (H6M) (5 μM) is pH independent, displaying minimal fluorescence intensity across pH 4.33 to 7.40 at a concentration of 5 μM when excited at 450 nm[1].
HDAC-IN-101 (H6M) (5 μM; 0-6 h) is activated by 10 μg/mL NTR and 500 μM NADH at pH 4.00, showing time-dependent fluorescence enhancement at 500 nm over 6 h of incubation[1].
HDAC-IN-101 (H6M) (5 μM) shows high selectivity for NTR and low pH (4.00), exhibiting significant fluorescence enhancement at 500 nm only when treated with 10 μg/mL NTR and 500 μM NADH at pH 4.00[1].
HDAC-IN-101 (H6M) (1 μM; 0-4 h) selectively activates fluorescence in HeLa cells with high NTR expression, showing time-dependent enhancement over 4 h of incubation, while displaying minimal fluorescence in LO2 cells[1].

MedChemExpress (MCE) has not independently confirmed the accuracy of these methods. They are for reference only.

In Vivo

HDAC-IN-101 (compound H6M) (40 mg/kg; i.v.; single dose) produces a tumor-specific fluorescence signal with a tumor-to-normal tissue ratio of 3.17 to 12.09, enabling accurate tumor margin identification and imaging-guided resection in HeLa xenograft-bearing BALB/c nude mice[1].

MedChemExpress (MCE) has not independently confirmed the accuracy of these methods. They are for reference only.

Animal Model: BALB/c nude (female, 6 weeks old)[1]
Dosage: 40 mg/kg
Administration: i.v.; single dose
Result: Detected bright fluorescence specifically at the tumor site, with minimal signal at non-target sites.
Confirmed significantly more intense fluorescent signal in tumors than in major organs, with a tumor-to-normal tissue ratio ranging from 3.17 to 12.09.
Enabled clear identification of tumor margins to guide successful tumor resection.
Molecular Weight

453.45

Formula

C25H19N5O4

CAS No.
SMILES

O=C(C1=CC=C(C=C1)CNC2=CC3=C(C(C4=CC=C(C=C4)[N+]([O-])=O)=N2)NC5=C3C=CC=C5)NO

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HDAC-IN-101
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HY-D3167
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