TRIM47 - tripartite motif containing 47 Gene

Also Known as GOA; RNF100

Species: Homo sapiens

Gene Type: protein coding
Gene ID: 91107

About TRIM47

Cytogenetic location: 17q25.1 Genomic coordinates (GRCh38): 17:75,874,164-75,878,581 (from NCBI)

This gene has 7 transcripts (splice variants), 166 orthologues and 80 paralogues. Ubiquitous expression in brain (RPKM 11.4), kidney (RPKM 8.9) and 24 other tissues.

Summary

Enables ubiquitin-protein transferase activity. Involved in protein ubiquitination. Located in cytosol. [provided by Alliance of Genome Resources, Apr 2022]

TRIM47 Products (1)

mRNA Protein Name
NM_033452.3 NP_258411.2 E3 ubiquitin-protein ligase TRIM47

Gene Ontology

  • Molecular Function
  • Biological Process
Molecular Function GO Annotation Evidence References Source
enables protein binding IPI
IPI: Inferred from physical interaction
32296183 GOA
enables ubiquitin protein ligase activity IDA
IDA: Inferred from direct assay
34110282 GOA
enables ubiquitin-protein transferase activity IDA
IDA: Inferred from direct assay
29291351 GOA
Biological Process GO Annotation Evidence References Source
involved in protein ubiquitination IDA
IDA: Inferred from direct assay
29291351 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

TRIM47 Protein Structure

zf-C3HC4_4

zf-C3HC4_4: zinc finger of C3HC4-type, RING (9 - 57)

zf-B_box

zf-B_box: B-box zinc finger (178 - 217)

SPRY

SPRY: SPRY domain (480 - 566)

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  • 600
  • 638 a.a.
Protein Preferred Names Protein Names

E3 ubiquitin-protein ligase TRIM47

  • RING finger protein 100

Related Agents

  • Pre-clinical Phase

Pre-clinical Phase

Bioactive Molecules (3)
Cat. No. Product Name
Effect
Purity
Rare Diseases
HY-RS15051 TRIM47 Human Pre-designed siRNA Set A Pre-designed Set / Unkown
HY-RS21210 Trim47 Mouse Pre-designed siRNA Set A Pre-designed Set / Unkown
HY-RS27726 Trim47 Rat Pre-designed siRNA Set A Pre-designed Set / Unkown

Orthologs Information

Species Symbol Source ID
Bos taurus TRIM47 VGNC VGNC:36339
Rattus norvegicus TRIM47 RGD RGD:1597317
Felis catus TRIM47 VGNC VGNC:66543
Macaca mulatta TRIM47 VGNC VGNC:79171
Mus musculus TRIM47 MGD MGI:1917374
Others TRIM47 NCBI