Structural basis for chemokine recognition and receptor activation of chemokine receptor CCR5

  • Nat Commun. 2021 Jul 6;12(1):4151. doi: 10.1038/s41467-021-24438-5.
Hui Zhang  #  1  2  3 Kun Chen  #  1  2  3 Qiuxiang Tan  #  1 Qiang Shao  #  1 Shuo Han  #  2 Chenhui Zhang  1  2  3 Cuiying Yi  2 Xiaojing Chu  1 Ya Zhu  4 Yechun Xu  5  6  7 Qiang Zhao  8  9  10  11 Beili Wu  12  13  14  15
Affiliations
  • 1. CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China.
  • 2. State Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China.
  • 3. University of Chinese Academy of Sciences, Beijing, China.
  • 4. State Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China. [email protected].
  • 5. CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China. [email protected].
  • 6. University of Chinese Academy of Sciences, Beijing, China. [email protected].
  • 7. School of Pharmaceutical Science and Technology, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou, China. [email protected].
  • 8. State Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China. [email protected].
  • 9. University of Chinese Academy of Sciences, Beijing, China. [email protected].
  • 10. School of Pharmaceutical Science and Technology, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou, China. [email protected].
  • 11. Zhongshan Branch, the Institute of Drug Discovery and Development, CAS, Zhongshan, China. [email protected].
  • 12. CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China. [email protected].
  • 13. University of Chinese Academy of Sciences, Beijing, China. [email protected].
  • 14. School of Pharmaceutical Science and Technology, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou, China. [email protected].
  • 15. School of Life Science and Technology, ShanghaiTech University, Shanghai, China. [email protected].
  • # Contributed equally.
Abstract

The Chemokine Receptor CCR5 plays a vital role in immune surveillance and inflammation. However, molecular details that govern its endogenous chemokine recognition and receptor activation remain elusive. Here we report three cryo-electron microscopy structures of Gi1 protein-coupled CCR5 in a ligand-free state and in complex with the chemokine MIP-1α or RANTES, as well as the crystal structure of MIP-1α-bound CCR5. These structures reveal distinct binding modes of the two chemokines and a specific accommodate pattern of the chemokine for the distal N terminus of CCR5. Together with functional data, the structures demonstrate that chemokine-induced rearrangement of toggle switch and plasticity of the receptor extracellular region are critical for receptor activation, while a conserved tryptophan residue in helix II acts as a trigger of receptor constitutive activation.