Discovery of Monovalent Direct Degraders of BRD4 That Act Via the Recruitment of DCAF11

  • Mol Cancer Ther. 2024 Jun 22. doi: 10.1158/1535-7163.MCT-24-0219.
Gregory S Parker  1 Julia I Toth  1 Sarah Fish  1 Gabrielle A Blanco  1 Taylor Kampert  1 Xiaoming Li  2 Linette Yang  1 Craig R Stumpf  1 Kenneth Steadman  1 Aleksandar Jamborcic  1 Stephen Chien  1 Elizabeth Daniele  1 Alejandro Dearie  1 Geoffray Leriche  1 Simon Bailey  1 Peggy A Thompson  1
Affiliations
  • 1. Plexium, San Diego, CA, United States.
  • 2. Halozyme Therapeutics, Inc., United States.
Abstract

Targeted protein degradation (TPD) using the ubiquitin Proteasome system (UPS) is a rapidly growing drug discovery modality to eliminate pathogenic proteins. Strategies for TPD have focused on heterobifunctional degraders that often suffer from poor drug-like properties, and Molecular Glues that rely on serendipitous discovery. Monovalent "direct" degraders represent an alternative approach, in which small molecules bind to a target protein and induce degradation of that protein through the recruitment of an E3 Ligase complex. Using an ultra-high throughput cell-based screening platform, degraders of the bromodomain extra-terminal (BET) protein BRD4 were identified and optimized to yield a lead compound, PLX-3618. In this paper, we demonstrate that PLX-3618 elicited UPS-mediated selective degradation of BRD4, resulting in potent anti-tumor activity in vitro and in vivo. Characterization of the degradation mechanism identified DCAF11 as the E3 Ligase required for PLX-3618-mediated degradation of BRD4. Protein-protein interaction studies verified a BRD4:PLX-3618:DCAF11 ternary complex, and mutational studies provided further insights into the DCAF11-mediated degradation mechanism. Collectively, these results demonstrate the discovery and characterization of a novel small molecule that selectively degrades BRD4 through the recruitment of the E3 substrate receptor, DCAF11, and promotes potent anti-tumor activity in vivo.

Products