PTPRK - protein tyrosine phosphatase receptor type K Gene
Also Known as R-PTP-kappa
Species: Homo sapiens
About PTPRK
This gene has 22 transcripts (splice variants), 1 gene allele, 209 orthologues, 35 paralogues and is associated with 90 phenotypes. Ubiquitous expression in gall bladder (RPKM 16.8), colon (RPKM 13.7) and 24 other tissues.
Summary
The protein encoded by this gene is a member of the protein tyrosine Phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic transformation. This PTP possesses an extracellular region, a single transmembrane region, and two tandem catalytic domains, and thus represents a receptor-type PTP. The extracellular region contains a meprin-A5 antigen-PTP mu (MAM) domain, an Ig-like domain and four fibronectin type III-like repeats. This PTP was shown to mediate homophilic intercellular interaction, possibly through the interaction with beta- and gamma-catenin at adherens junctions. Expression of this gene was found to be stimulated by TGF-beta 1, which may be important for the inhibition of keratinocyte proliferation. [provided by RefSeq, Jul 2008]
PTPRK Products (6)
| mRNA | Protein | Name |
|---|---|---|
| NM_001135648.3 | NP_001129120.1 | receptor-type tyrosine-protein phosphatase kappa isoform a precursor |
| NM_001291981.2 | NP_001278910.1 | receptor-type tyrosine-protein phosphatase kappa isoform c precursor |
| NM_001291982.2 | NP_001278911.1 | receptor-type tyrosine-protein phosphatase kappa isoform d precursor |
| NM_001291983.2 | NP_001278912.1 | receptor-type tyrosine-protein phosphatase kappa isoform e |
| NM_001291984.2 | NP_001278913.1 | receptor-type tyrosine-protein phosphatase kappa isoform f precursor |
| NM_002844.4 | NP_002835.2 | receptor-type tyrosine-protein phosphatase kappa isoform b precursor |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables beta-catenin binding |
IPI
IPI: Inferred from physical interaction
|
8663237 | GOA |
| enables gamma-catenin binding |
IPI
IPI: Inferred from physical interaction
|
8663237 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
15899872 | GOA |
| enables protein kinase binding |
IPI
IPI: Inferred from physical interaction
|
15899872 | GOA |
| enables protein tyrosine phosphatase activity |
IDA
IDA: Inferred from direct assay
|
8663237 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in cell surface |
IDA
IDA: Inferred from direct assay
|
18276111 | GOA |
| located in cell-cell junction |
IDA
IDA: Inferred from direct assay
|
8663237 | GOA |
| located in leading edge membrane |
IDA
IDA: Inferred from direct assay
|
15899872 | GOA |
PTPRK Protein Structure
MAM: MAM domain, meprin/A5/mu (36 - 193)
Ig_2: Immunoglobulin domain (201 - 288)
fn3: Fibronectin type III domain (296 - 370)
fn3: Fibronectin type III domain (504 - 582)
Y_phosphatase: Protein-tyrosine phosphatase (910 - 1140)
Y_phosphatase: Protein-tyrosine phosphatase (1200 - 1434)
- 0
- 300
- 600
- 900
- 1200
- 1439 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
receptor-type tyrosine-protein phosphatase kappa |
|
PTPRK Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
PTPRK | Q15262 | LOX | Homo sapiens | P28300 | 21690299 | |
|
Intra
|
PTPRK | Q15262 | LOX | Homo sapiens | P28300 | 21690299 | |
|
Intra
|
PTPRK | Q15262 | INSR | Homo sapiens | P06213 | 33961781 |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Extragonadal Germ Cell Cancer |
|
|
| Eye Lymphoma |
|
|
| Central Nervous System Hematologic Cancer |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Bos taurus | PTPRK | VGNC | VGNC:33552 |
| Mus musculus | PTPRK | MGD | MGI:103310 |
| Canis familiaris | PTPRK | VGNC | VGNC:45191 |
| Felis catus | PTPRK | VGNC | VGNC:69176 |
| Macaca mulatta | PTPRK | VGNC | VGNC:83453 |
| Rattus norvegicus | PTPRK | RGD | RGD:619706 |
| Others | PTPRK | NCBI |