Plec - plectin Gene
Also Known as Pcn; Pltn; Plec1
Species: Rattus norvegicus
Summary
Plectin is a prominent member of an important family of structurally and in part functionally related proteins, termed plakins or cytolinkers, that are capable of interlinking different elements of the Cytoskeleton. Plakins, with their multi-domain structure and enormous size, not only play crucial roles in maintaining cell and tissue integrity and orchestrating dynamic changes in cytoarchitecture and cell shape, but also serve as scaffolding platforms for the assembly, positioning, and regulation of signaling complexes (for reviews see PMID: 9701547, 11854008, and 17499243). Plectin is expressed as several protein isoforms in a wide range of cell types and tissues from a single gene located on chromosome 8 in humans (PMID: 8633055, 8698233). Until 2010, this locus was named plectin 1 (symbol PLEC1 in human; Plec1 in mouse and rat) and the gene product had been referred to as "hemidesmosomal protein 1" or "plectin 1, intermediate filament binding 500kDa". These names were replaced by plectin. The plectin gene locus in mouse on chromosome 15 has been analyzed in detail (PMID: 10556294, 14559777), revealing a genomic exon-intron organization with well over 40 exons spanning over 62 kb and an unusual 5' transcript complexity of plectin isoforms. Eleven exons (1-1j) have been identified that alternatively splice directly into a common exon 2 which is the first exon to encode plectin's highly conserved actin binding domain (ABD). Three additional exons (-1, 0a, and 0) splice into an alternative first coding exon (1c), and two additional exons (2alpha and 3alpha) are optionally spliced within the exons encoding the acting binding domain (exons 2-8). Analysis of the human locus has identified eight of the eleven alternative 5' exons found in mouse and rat (PMID: 14672974); exons 1i, 1j and 1h have not been confirmed in human. Furthermore, isoforms lacking the central rod domain encoded by exon 31 have been detected in mouse (PMID:10556294), rat (PMID: 9177781), and human (PMID: 11441066, 10780662, 20052759). The short alternative amino-terminal sequences encoded by the different first exons direct the targeting of the various isoforms to distinct subcellular locations (PMID: 14559777). As the expression of specific plectin isoforms was found to be dependent on cell type (tissue) and stage of development (PMID: 10556294, 12542521, 17389230) it appears that each cell type (tissue) contains a unique set (proportion and composition) of plectin isoforms, as if custom-made for specific requirements of the particular cells. Concordantly, individual isoforms were found to carry out distinct and specific functions (PMID: 14559777, 12542521, 18541706). In 1996, a number of groups reported that patients suffering from epidermolysis bullosa simplex with muscular dystrophy (EBS-MD) lacked plectin expression in skin and muscle tissues due to defects in the plectin gene (PMID: 8698233, 8941634, 8636409, 8894687, 8696340). Two Other subtypes of plectin-related EBS have been described: EBS-pyloric atresia (PA) and EBS-Ogna. For reviews of plectin-related diseases see PMID: 15810881, 19945614. Mutations in the plectin gene related to human diseases should be named based on the position in NM_000445 (human variant 1, isoform 1c), unless the mutation is located within one of the Other alternative first exons, in which case the position in the respective Reference Sequence should be used. [provided by RefSeq, Aug 2011]
Plec Products (11)
| mRNA | Protein | Name |
|---|---|---|
| NM_001164296.2 | NP_001157768.1 | plectin isoform 1c |
| NM_001164297.2 | NP_001157769.1 | plectin isoform 1f |
| NM_001164298.2 | NP_001157770.1 | plectin isoform 1e |
| NM_001164299.2 | NP_001157771.1 | plectin isoform 1hij |
| NM_001164302.2 | NP_001157774.1 | plectin isoform 1hij |
| NM_001164303.2 | NP_001157775.1 | plectin isoform 1d |
| NM_001164304.2 | NP_001157776.1 | plectin isoform 1b |
| NM_001164305.2 | NP_001157777.1 | plectin isoform 1hij |
| NM_001164307.2 | NP_001157779.1 | plectin isoform 1g |
| NM_001164308.2 | NP_001157780.1 | plectin isoform 1a |
| NM_022401.3 | NP_071796.2 | plectin isoform 1 |
| Molecular Function GO Annotation | Evidence | Références | Source |
|---|---|---|---|
| enables ankyrin binding |
IPI
IPI: Inferred from physical interaction
|
21223964 | RGD |
| enables cytoskeletal protein binding |
IDA
IDA: Inferred from direct assay
|
12095991 | RGD |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
12200133 | RGD |
| enables structural constituent of cytoskeleton |
IMP
IMP: Inferred from mutant phenotype
|
12095991 | RGD |
| Biological Process GO Annotation | Evidence | Références | Source |
|---|---|---|---|
| involved in epithelial cell differentiation |
IEP
IEP: Inferred from expression pattern
|
8686756 | RGD |
| involved in female pregnancy |
IEP
IEP: Inferred from expression pattern
|
12389737 | RGD |
| involved in response to nutrient |
IDA
IDA: Inferred from direct assay
|
12095991 | RGD |
| Cellular Component GO Annotation | Evidence | Références | Source |
|---|---|---|---|
| located in apical plasma membrane |
IDA
IDA: Inferred from direct assay
|
12389737 | RGD |
| located in basal plasma membrane |
IDA
IDA: Inferred from direct assay
|
12389737 | RGD |
| located in perinuclear region of cytoplasm |
IDA
IDA: Inferred from direct assay
|
8686756 | RGD |
| located in sarcolemma |
IDA
IDA: Inferred from direct assay
|
11482454 | RGD |
| located in sarcoplasm |
IDA
IDA: Inferred from direct assay
|
21223964 | RGD |
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
plectin |
|