The RNA-binding protein hnRNP F is required for the germinal center B cell response

  • Nat Commun. 2023 Mar 30;14(1):1731. doi: 10.1038/s41467-023-37308-z.
Hengjun Huang  1 Yuxing Li  1 Gaopu Zhang  1 Gui-Xin Ruan  2 Zhijian Zhu  1 Wenjing Chen  1 Jia Zou  3 Rui Zhang  1 Jing Wang  1 Yu Ouyang  1 Shengli Xu  4  5 Xijun Ou  6
Affiliations
  • 1. School of Life Sciences, Southern University of Science and Technology, Shenzhen, 518055, China.
  • 2. Medical School, Taizhou University, Taizhou, 318000, China.
  • 3. Department of Computer Science and Engineering, College of Engineering, Southern University of Science and Technology, Shenzhen, 518055, China.
  • 4. Singapore Immunology Network, Agency for Science, Technology and Research, Singapore, 138648, Singapore. [email protected].
  • 5. Department of Physiology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, 117599, Singapore. [email protected].
  • 6. School of Life Sciences, Southern University of Science and Technology, Shenzhen, 518055, China. [email protected].
Abstract

The T cell-dependent (TD) antibody response involves the generation of high affinity, immunoglobulin heavy chain class-switched antibodies that are generated through germinal center (GC) response. This process is controlled by coordinated transcriptional and post-transcriptional gene regulatory mechanisms. RNA-binding proteins (RBPs) have emerged as critical players in post-transcriptional gene regulation. Here we demonstrate that B cell-specific deletion of RBP hnRNP F leads to diminished production of class-switched antibodies with high affinities in response to a TD antigen challenge. B cells deficient in hnRNP F are characterized by defective proliferation and c-Myc upregulation upon antigenic stimulation. Mechanistically, hnRNP F directly binds to the G-tracts of CD40 pre-mRNA to promote the inclusion of CD40 exon 6 that encodes its transmembrane domain, thus enabling appropriate CD40 cell surface expression. Furthermore, we find that hnRNP A1 and A2B1 can bind to the same region of CD40 pre-mRNA but suppress exon 6 inclusion, suggesting that these hnRNPs and hnRNP F might antagonize each-other's effects on CD40 splicing. In summary, our study uncovers an important posttranscriptional mechanism regulating the GC response.

Products