A dual-targeting strategy: Novel 6-substituted 3-Hydroxypyridin-4(1H)-one-hydroxamate conjugates against Pseudomonas aeruginosa biofilm

  • Bioorg Chem. 2026 Jul 5:175:109837. doi: 10.1016/j.bioorg.2026.109837.
Xuemin Jia  1 Wenzhang Chen  2 Dawei Wang  3 Luying Chen  3 Ting He  3 Hong Tan  3 Junjie Lan  4 Ni Zhang  5 Jinyu Li  5 Lingling Fan  2 Junxia Zheng  6 Yuanyong Yang  7 Weidong Pan  8
Affiliations
  • 1. College of Pharmacy/State Key Laboratory of Discovery and Utilization of Functional Components in Traditional Chinese Medicine/Guizhou·Provincial·Key·Laboratory of Innovation and·Manufacturing for Pharmaceuticals, Guizhou Medical University, Guiyang 561113, PR China; Natural Products Research Center of Guizhou Province, Guiyang 550014, PR China.
  • 2. College of Pharmacy/State Key Laboratory of Discovery and Utilization of Functional Components in Traditional Chinese Medicine/Guizhou·Provincial·Key·Laboratory of Innovation and·Manufacturing for Pharmaceuticals, Guizhou Medical University, Guiyang 561113, PR China.
  • 3. Key laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education)/School of Pharmaceutical Sciences, Guizhou University, Guiyang 550025, PR China.
  • 4. Department of Pharmacy, Guizhou Provincial People's Hospital, Guiyang 550002, PR China.
  • 5. Natural Products Research Center of Guizhou Province, Guiyang 550014, PR China.
  • 6. School of Biomedical and Pharmaceutical Sciences, Guangdong University of Technology, Guangzhou 510006, PR China; Key Laboratory of Xinjiang Phytomedicine Resource and Utilization, Ministry of Education, School of Pharmacy, Shihezi University, Shihezi 832003, PR China. Electronic address: [email protected].
  • 7. College of Pharmacy/State Key Laboratory of Discovery and Utilization of Functional Components in Traditional Chinese Medicine/Guizhou·Provincial·Key·Laboratory of Innovation and·Manufacturing for Pharmaceuticals, Guizhou Medical University, Guiyang 561113, PR China. Electronic address: [email protected].
  • 8. College of Pharmacy/State Key Laboratory of Discovery and Utilization of Functional Components in Traditional Chinese Medicine/Guizhou·Provincial·Key·Laboratory of Innovation and·Manufacturing for Pharmaceuticals, Guizhou Medical University, Guiyang 561113, PR China. Electronic address: [email protected].
Abstract

Pseudomonas aeruginosa is a formidable Gram-negative threat in clinics, where its extensive Antibiotic resistance is largely rooted in a remarkable capacity for biofilm formation. There is a complex interplay between iron metabolism and quorum sensing, which collectively coordinate the formation and development of biofilms. In this work, a series of novel 6-substituted 3-hydroxypyridin-4(1H)-one-conjugated hydroxamic acid derivatives were designed as dual-effect biofilm inhibitors with quorum sensing inhibition and iron chelation. Structure-activity relationship analysis identified 6-substituted 3-hydroxypyridin-4-one derivative 5j as the most potent one, with an IC50 of 2.66 ± 0.46 μM against P. aeruginosa biofilm formation. Mechanistic studies revealed that 5j simultaneously disrupts key QS pathways (las, pqs, and rhl), significantly reducing the production of virulence factors. Concurrently, 5j acts as a potent iron chelator, competitively depriving bacteria of essential iron. Transcriptomics and molecular modeling revealed that this iron starvation, potentially facilitated by interaction with the FpvA receptor, triggers severe metabolic dysregulation. Moreover, in a wound Infection mouse model, 5j enhanced the efficacy of the first-line drug tobramycin by 1000-fold compared to tobramycin alone. In conclusion, this study confirms that compound 5j functions as a dual-action inhibitor against Bacterial biofilms by targeting the QS system and iron homeostasis. By inhibiting biofilm formation and potentiating Antibiotic efficacy, it emerges as a highly promising synergistic agent for the treatment of Bacterial infections.

Keywords
6-substituted 3-Hydroxypyridin-4(1H)-one-hydroxamate; Biofilm inhibitor; Iron homeostasis; Pseudomonas aeruginosa; Quorum sensing.
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