Design, Synthesis, and Antiviral Activity of 8‑Aza Fluoroneplanocin Derivatives Targeting SAH Hydrolase and Viral RdRp

  • ACS Med Chem Lett. 2025 Oct 21;16(11):2248-2256. doi: 10.1021/acsmedchemlett.5c00463.
Jiyoon Song  1 Hongseok Choi  1 Minjae Kim  1 Dnyandev B Jarhad  1 Yejin Jang  2 Haemi Lee  2 Meehyein Kim  2 Ji Won Park  1 Tong-Shin Chang  1 Vikas R Aswar  1 Lak Shin Jeong  1  3
Affiliations
  • 1. Research Institute of Pharmaceutical Sciences, College of Pharmacy, Seoul National University, Seoul 08826, Republic of Korea.
  • 2. Infectious Diseases Therapeutic Research Center, Korea Research Institute of Chemical Technology, Daejeon 34114, Republic of Korea.
  • 3. Future Medicine Co., Ltd, 54 Changup-ro, Sujeong-gu, Seongnam, Gyeonggi-do 13449, Republic of Korea.
Abstract

RNA viruses such as SARS-CoV-2 and Dengue Virus pose global health threats, highlighting the urgent need for broad-spectrum antivirals with improved safety. We synthesized 8-aza Fluoroneplanocin derivatives designed to reduce cytotoxicity while maintaining Antiviral potency. Among them, compound 3a, bearing an 8-aza adenine base, exhibited its potential broad-spectrum activity against SARS-CoV-2 (EC50 = 12.2 μM) and Dengue Virus (E50 = 37.4 μM), with no detectable cytotoxicity (CC50 > 100 μM). Mechanistic studies showed that 3a moderately inhibited S-adenosylhomocysteine (SAH) hydrolase (IC50 = 1.51 μM), in contrast to the potent inhibition by Fluoroneplanocin A (1, IC50 = 0.15 μM), indicating that weaker SAH hydrolase inhibition contributes to reduced toxicity. Docking against SARS-CoV-2 RdRp revealed that 3a formed an additional hydrogen bond with Arg555, supporting RdRp binding as a complementary mechanism. Collectively, these results demonstrate the dual-targeting potential of 8-aza Fluoroneplanocins, offering a promising scaffold for the development of safe and effective broad-spectrum nucleoside antivirals.

Keywords
8-Aza Fluoroneplanocin; Antiviral activity; Dengue virus; RNA-dependent RNA polymerase; SAH hydrolase; SARS-CoV-2; and Influenza virus.
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