CRX - cone-rod homeobox Gene
Also Known as CRD; LCA7; OTX3; CORD2
Species: Homo sapiens
About CRX
This gene has 6 transcripts (splice variants), 118 orthologues, 50 paralogues and is associated with 8 phenotypes. Low expression observed in reference dataset.
Summary
The protein encoded by this gene is a photoreceptor-specific transcription factor which plays a role in the differentiation of photoreceptor cells. This homeodomain protein is necessary for the maintenance of normal cone and rod function. Mutations in this gene are associated with photoreceptor degeneration, Leber congenital amaurosis type III and the autosomal dominant cone-rod dystrophy 2. Several alternatively spliced transcript variants of this gene have been described, but the full-length nature of some variants has not been determined. [provided by RefSeq, Jul 2008]
CRX Products (1)
| mRNA | Protein | Name |
|---|---|---|
| NM_000554.6 | NP_000545.1 | cone-rod homeobox protein |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables DNA-binding transcription activator activity, RNA polymerase II-specific |
IDA
IDA: Inferred from direct assay
|
10625658 | GOA |
| enables RNA polymerase II cis-regulatory region sequence-specific DNA binding |
IDA
IDA: Inferred from direct assay
|
10625658 | GOA |
| enables leucine zipper domain binding |
IPI
IPI: Inferred from physical interaction
|
10887186 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
16189514 | GOA |
| enables sequence-specific double-stranded DNA binding |
IDA
IDA: Inferred from direct assay
|
28473536 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in positive regulation of transcription by RNA polymerase II |
IDA
IDA: Inferred from direct assay
|
10625658 | GOA |
CRX Protein Structure
Homeobox: Homeobox domain (40 - 96)
TF_Otx: Otx1 transcription factor (164 - 250)
- 0
- 100
- 200
- 299 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
cone-rod homeobox protein |
|
CRX Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
CRX | O43186 | ROR2 | Homo sapiens | A1L4F5 | 25416956 | |
|
Intra
|
CRX | O43186 | ROR2 | Homo sapiens | A1L4F5 | 25416956 | |
|
Intra
|
CRX | O43186 | GCM2 | Homo sapiens | O75603 | 31515488 | |
|
Intra
|
CRX | O43186 | GCM2 | Homo sapiens | O75603 | 25416956 | |
|
Intra
|
CRX | O43186 | GCM2 | Homo sapiens | O75603 | 25416956 | |
|
Intra
|
CRX | O43186 | GCM2 | Homo sapiens | O75603 | 25416956 | |
|
Intra
|
CRX | O43186 | GCM2 | Homo sapiens | O75603 | 29892012 | |
|
Intra
|
CRX | O43186 | GCM2 | Homo sapiens | O75603 | 32296183 | |
|
Intra
|
CRX | O43186 | LIMS4 | Homo sapiens | P0CW20 | 32296183 | |
|
Intra
|
CRX | O43186 | ZNF483 | Homo sapiens | Q6P088 | 32296183 | |
|
Intra
|
CRX | O43186 | SZT2 | Homo sapiens | Q5T011-5 | 25416956 | |
|
Intra
|
CRX | O43186 | LARP4 | Homo sapiens | Q71RC2-6 | 25416956 | |
|
Intra
|
CRX | O43186 | PID1 | Homo sapiens | Q7Z2X4 | 25416956 | |
|
Intra
|
CRX | O43186 | PID1 | Homo sapiens | Q7Z2X4 | 25416956 | |
|
Intra
|
CRX | O43186 | NEIL2 | Homo sapiens | Q969S2 | 32296183 | |
|
Intra
|
CRX | O43186 | PPP1R16B | Homo sapiens | Q96T49 | 31515488 | |
|
Intra
|
CRX | O43186 | PPP1R16B | Homo sapiens | Q96T49 | 25416956 | |
|
Intra
|
CRX | O43186 | SEC14L4 | Homo sapiens | Q9UDX3 | 32296183 | |
|
Intra
|
CRX | O43186 | PRKAB2 | Homo sapiens | O43741 | 25416956 | |
|
Intra
|
CRX | O43186 | PRKAB2 | Homo sapiens | O43741 | 32296183 | |
|
Intra
|
CRX | O43186 | PRKAB2 | Homo sapiens | O43741 | 25416956 | |
|
Intra
|
CRX | O43186 | PRKAB2 | Homo sapiens | O43741 | 31515488 | |
|
Intra
|
CRX | O43186 | BANP | Homo sapiens | Q8N9N5-2 | 32296183 | |
|
Intra
|
CRX | O43186 | SOX10 | Homo sapiens | P56693 | 32296183 | |
|
Intra
|
CRX | O43186 | LGALS3 | Homo sapiens | P17931 | 32296183 | |
|
Intra
|
CRX | O43186 | TLE5 | Homo sapiens | Q08117-2 | 32296183 | |
|
Intra
|
CRX | O43186 | TCF7L2 | Homo sapiens | Q9NQB0-10 | 32296183 | |
|
Intra
|
CRX | O43186 | SOX5 | Homo sapiens | P35711-4 | 32296183 | |
|
Intra
|
CRX | O43186 | IGFN1 | Homo sapiens | Q86VF2-5 | 32296183 | |
|
Intra
|
CRX | O43186 | NFYC | Homo sapiens | Q13952-2 | 32296183 | |
|
Intra
|
CRX | O43186 | CTNNA3 | Homo sapiens | Q9UI47-2 | 32296183 | |
|
Intra
|
CRX | O43186 | ZIC1 | Homo sapiens | Q15915 | 32296183 | |
|
Intra
|
CRX | O43186 | BANF2 | Homo sapiens | Q9H503-2 | 32296183 | |
|
Intra
|
CRX | O43186 | PRR35 | Homo sapiens | P0CG20 | 32296183 | |
|
Intra
|
CRX | O43186 | FAAP20 | Homo sapiens | Q6NZ36-4 | 32296183 | |
|
Intra
|
CRX | O43186 | MENT | Homo sapiens | Q9BUN1 | 32296183 | |
|
Intra
|
CRX | O43186 | SMAP1 | Homo sapiens | Q8IYB5-2 | 32296183 | |
|
Intra
|
CRX | O43186 | CIMIP4 | Homo sapiens | O43247-2 | 32296183 | |
|
Intra
|
CRX | O43186 | IRX6 | Homo sapiens | P78412 | 32296183 | |
|
Intra
|
CRX | O43186 | BOD1L2 | Homo sapiens | Q8IYS8 | 32296183 | |
|
Intra
|
CRX | O43186 | OR6B1 | Homo sapiens | O95007 | 32296183 | |
|
Intra
|
CRX | O43186 | FOXH1 | Homo sapiens | O75593 | 32296183 | |
|
Intra
|
CRX | O43186 | UBXN7 | Homo sapiens | O94888 | 32296183 | |
|
Intra
|
CRX | O43186 | LONRF1 | Homo sapiens | Q17RB8 | 32296183 | |
|
Intra
|
CRX | O43186 | LONRF1 | Homo sapiens | Q17RB8 | 25416956 | |
|
Intra
|
CRX | O43186 | LONRF1 | Homo sapiens | Q17RB8 | 25416956 | |
|
Intra
|
CRX | O43186 | KANK2 | Homo sapiens | Q63ZY3 | 32296183 | |
|
Intra
|
CRX | O43186 | QRICH1 | Homo sapiens | Q2TAL8 | 32296183 | |
|
Intra
|
CRX | O43186 | HNF1B | Homo sapiens | P35680 | 32296183 | |
|
Intra
|
CRX | O43186 | DELE1 | Homo sapiens | Q14154 | 25416956 | |
|
Intra
|
CRX | O43186 | SMAP2 | Homo sapiens | Q8WU79 | 32296183 | |
|
Intra
|
CRX | O43186 | TBX6 | Homo sapiens | O95947 | 32296183 | |
|
Intra
|
CRX | O43186 | C1orf50 | Homo sapiens | Q9BV19 | 32296183 | |
|
Intra
|
CRX | O43186 | C9orf72 | Homo sapiens | Q96LT7 | 25416956 | |
|
Intra
|
CRX | O43186 | SOX5 | Homo sapiens | P35711 | 25416956 | |
|
Intra
|
CRX | O43186 | TFG | Homo sapiens | Q92734 | 32296183 | |
|
Intra
|
CRX | O43186 | PSMA1 | Homo sapiens | P25786 | 32296183 | |
|
Intra
|
CRX | O43186 | RHOXF2 | Homo sapiens | Q9BQY4 | 32296183 | |
|
Intra
|
CRX | O43186 | EIF5A | Homo sapiens | P63241 | 25416956 | |
|
Intra
|
CRX | O43186 | NTF4 | Homo sapiens | P34130 | 32296183 | |
|
Intra
|
CRX | O43186 | SUOX | Homo sapiens | P51687 | 32296183 | |
|
Intra
|
CRX | O43186 | SUOX | Homo sapiens | P51687 | 32296183 | |
|
Intra
|
CRX | O43186 | ATP6V0D2 | Homo sapiens | Q8N8Y2 | 32296183 | |
|
Intra
|
CRX | O43186 | TLX3 | Homo sapiens | O43711 | 32296183 | |
|
Intra
|
CRX | O43186 | CCNC | Homo sapiens | P24863 | 25416956 | |
|
Intra
|
CRX | O43186 | MLLT6 | Homo sapiens | Q6P2C6 | 25416956 | |
|
Intra
|
CRX | O43186 | PSMB10 | Homo sapiens | P40306 | 25416956 | |
|
Intra
|
CRX | O43186 | ROR2 | Homo sapiens | Q01974 | 32296183 | |
|
Intra
|
CRX | O43186 | ARIH2 | Homo sapiens | O95376 | 32296183 | |
|
Intra
|
CRX | O43186 | CDKN2C | Homo sapiens | P42773 | 32296183 | |
|
Intra
|
CRX | O43186 | TLE5 | Homo sapiens | Q08117 | 25416956 | |
|
Intra
|
CRX | O43186 | TLE5 | Homo sapiens | Q08117 | 25416956 | |
|
Intra
|
CRX | O43186 | CA8 | Homo sapiens | P35219 | 25416956 | |
|
Intra
|
CRX | O43186 | CA8 | Homo sapiens | P35219 | 25416956 | |
|
Intra
|
CRX | O43186 | PNMA6A | Homo sapiens | P0CW24 | 32296183 | |
|
Intra
|
CRX | O43186 | PNMA6A | Homo sapiens | P0CW24 | 32296183 | |
|
Intra
|
CRX | O43186 | GLIS2 | Homo sapiens | Q9BZE0 | 32296183 | |
|
Intra
|
CRX | O43186 | LNX1 | Homo sapiens | Q8TBB1 | 32296183 | |
|
Intra
|
CRX | O43186 | GYS1 | Homo sapiens | P13807 | 32296183 | |
|
Intra
|
CRX | O43186 | SUFU | Homo sapiens | Q9UMX1 | 32296183 | |
|
Intra
|
CRX | O43186 | AASDHPPT | Homo sapiens | Q9NRN7 | 32296183 | |
|
Intra
|
CRX | O43186 | C19orf25 | Homo sapiens | Q9UFG5 | 32296183 | |
|
Intra
|
CRX | O43186 | ZC3H10 | Homo sapiens | Q96K80 | 32296183 | |
|
Intra
|
CRX | O43186 | SPG21 | Homo sapiens | Q9NZD8 | 32296183 | |
|
Intra
|
CRX | O43186 | SAE1 | Homo sapiens | Q9UBE0 | 32296183 | |
|
Intra
|
CRX | O43186 | ABI2 | Homo sapiens | Q9NYB9 | 25416956 | |
|
Intra
|
CRX | O43186 | ABI2 | Homo sapiens | Q9NYB9 | 29892012 | |
|
Intra
|
CRX | O43186 | ABI2 | Homo sapiens | Q9NYB9 | 25416956 | |
|
Intra
|
CRX | O43186 | MYOZ1 | Homo sapiens | Q9NP98 | 32296183 | |
|
Intra
|
CRX | O43186 | ATG12 | Homo sapiens | O94817 | 25416956 | |
|
Intra
|
CRX | O43186 | ATG12 | Homo sapiens | O94817 | 25416956 | |
|
Intra
|
CRX | O43186 | ATG12 | Homo sapiens | O94817 | 25416956 | |
|
Intra
|
CRX | O43186 | M1AP | Homo sapiens | Q8TC57 | 16189514 | |
|
Intra
|
CRX | O43186 | M1AP | Homo sapiens | Q8TC57 | 32296183 | |
|
Intra
|
CRX | O43186 | NIP7 | Homo sapiens | Q9Y221 | 25416956 | |
|
Intra
|
CRX | O43186 | CFAP206 | Homo sapiens | Q8IYR0 | 32296183 | |
|
Intra
|
CRX | O43186 | STK16 | Homo sapiens | O75716 | 25416956 | |
|
Intra
|
CRX | O43186 | GUCD1 | Homo sapiens | Q96NT3 | 25416956 | |
|
Intra
|
CRX | O43186 | GUCD1 | Homo sapiens | Q96NT3 | 25416956 | |
|
Intra
|
CRX | O43186 | OSGIN1 | Homo sapiens | Q9UJX0 | 25416956 | |
|
Intra
|
CRX | O43186 | OSGIN1 | Homo sapiens | Q9UJX0 | 25416956 | |
|
Intra
|
CRX | O43186 | SOX3 | Homo sapiens | P41225 | 32296183 | |
|
Intra
|
CRX | O43186 | SOX14 | Homo sapiens | O95416 | 32296183 | |
|
Intra
|
CRX | O43186 | ATXN1 | Homo sapiens | P54253 | 32296183 | |
|
Intra
|
CRX | O43186 | TNS2 | Homo sapiens | Q63HR2 | 32296183 | |
|
Cross
|
CRX | O43186 | tax | Human T-cell leukemia virus | P03410 | 22458338 |
CRX Antibodies
| Cat. No. | Product Name | Application | Reactivity |
|---|---|---|---|
| HY-P81439 | CRX Antibody (YA1184) | IHC-P, mIHC | Human, Rat |
| HY-P81439A | CRX Antibody (YA1184)(PBS only) | IHC-P, mIHC | Human, Rat |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Cone-Rod Dystrophy 2 |
|
|
| Leber Congenital Amaurosis 7 |
|
|
| Retinitis Pigmentosa |
|
|
| Macular Dystrophy, Concentric Annular |
|
|
| Leber Plus Disease |
|
|
| Retinitis Pigmentosa 91 |
|
|
| Leber Congenital Amaurosis 1 |
|
|
| Fundus Dystrophy |
|
|
| Stargardt Disease |
|
|
| Enhanced S-Cone Syndrome |
|
|
| Stargardt Disease 1 |
|
|
| Keratoconus |
|
|
| Retinal Degeneration |
|
|
| Cone-Rod Dystrophy 11 |
|
|
| Retinoschisis 1, X-Linked, Juvenile |
|
|
| Intraocular Retinoblastoma |
|
|
| Leber Congenital Amaurosis 4 |
|
|
| Retinoblastoma |
|
|
| Hereditary Choroidal Atrophy |
|
|
| Partial Central Choroid Dystrophy |
|
|
| Leber Congenital Amaurosis 3 |
|
|
| Retinal Cone Dystrophy 1 |
|
|
| Leber Congenital Amaurosis 8 |
|
|
| Leber Congenital Amaurosis 10 |
|
|
| Unilateral Retinoblastoma |
|
|
| Macular Degeneration, Age-Related, 1 |
|
|
| Choroidal Dystrophy, Central Areolar, 1 |
|
|
| Eye Degenerative Disease |
|
|
| Leber Congenital Amaurosis 9 |
|
|
| Leber Congenital Amaurosis 6 |
|
|
| Bardet-Biedl Syndrome |
|
|
| Retinitis Pigmentosa 9 |
|
|
| Retinitis Pigmentosa 1 |
|
|
| Spinocerebellar Ataxia 7 |
|
|
| Cone-Rod Dystrophy 3 |
|
|
| Pineoblastoma |
|
|
| Leber Congenital Amaurosis 2 |
|
|
| Thyroid Hormone Resistance, Selective Pituitary |
|
|
| Pineal Gland Cancer |
|
|
| Occult Macular Dystrophy |
|
|
| Diamond-Blackfan Anemia 6 |
|
|
| Retinitis Pigmentosa 33 |
|
|
| Pseudopapilledema |
|
|
| Vitelliform Macular Dystrophy |
|
|
| Degeneration Of Macula And Posterior Pole |
|
|
| Cone Dystrophy |
|
|
| Achromatopsia |
|
|
| Fundus Albipunctatus |
|
|
| Color Blindness |
|
|
| Joubert Syndrome 1 |
|
|
| Senior-Loken Syndrome 1 |
|
|
| Congenital Stationary Night Blindness |
|
|
| Night Blindness |
|
|
| Retinal Disease |
|
|
| Late-Onset Retinal Degeneration |
|
|
| Medulloblastoma |
|
|
| Keratitis, Hereditary |
|
|
| Sensory System Disease |
|
|
| Usher Syndrome |
|
|
| Coloboma Of Macula |
|
|
| Eye Disease |
|
|
| Nervous System Disease |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Macaca mulatta | CRX | VGNC | VGNC:109611 |
| Rattus norvegicus | CRX | RGD | RGD:620511 |
| Canis familiaris | CRX | VGNC | VGNC:39632 |
| Mus musculus | CRX | MGD | MGI:1194883 |
| Others | CRX | NCBI |