CDY1 - chromodomain Y-linked 1 Gene

Also Known as CDY; CDY1A

Species: Homo sapiens

Gene Type: protein coding
Gene ID: 9085

About CDY1

Cytogenetic location: Yq11.23 Genomic coordinates (GRCh38): Y:25,622,115-25,625,511 (from NCBI)

This gene has 2 transcripts (splice variants), 132 orthologues, 13 paralogues and is associated with 1 phenotype. Restricted expression toward testis (RPKM 2.1).

Summary

This gene encodes a protein containing a chromodomain and a Histone Acetyltransferase catalytic domain. Chromodomain proteins are components of heterochromatin-like complexes and can act as gene repressors. This protein is localized to the nucleus of late spermatids where histone hyperacetylation takes place. Histone hyperacetylation is thought to facilitate the transition in which protamines replace histones as the major DNA-packaging protein. The human chromosome Y has two identical copies of this gene within a palindromic region; this record represents the more telomeric copy. Chromosome Y also contains a pair of closely related genes in another more telomeric palindrome as well as several related pseudogenes. Two protein isoforms are encoded by transcript variants of this gene. Additional transcript variants have been described, but their full-length nature has not been determined. [provided by RefSeq, Jul 2008]

CDY1 Products (2)

mRNA Protein Name
NM_004680.3 NP_004671.1 testis-specific chromodomain protein Y 1 isoform b
NM_170723.2 NP_733841.1 testis-specific chromodomain protein Y 1 isoform a

CDY1 Protein Structure

Chromo

Chromo: Chromo (CHRromatin Organisation MOdifier) domain (6 - 57)

ECH_1

ECH_1: Enoyl-CoA hydratase/isomerase (290 - 534)

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  • 540 a.a.
Protein Preferred Names Protein Names

testis-specific chromodomain protein Y 1

  • chromodomain protein, Y chromosome, 1

Related Diseases

Diseases Alias
Spermatogenic Failure, Y-Linked, 2
  • SPGFY2

  • Spermatogenic Failure, Nonobstructive, Y-Linked

  • Y-Linked Spermatogenic Failure 2

  • Azoospermia, Nonobstructive, Y-Linked

  • Oligozoospermia, Nonobstructive, Y-Linked

  • Oligospermia, Nonobstructive, Y-Linked

  • Spermatogenic Arrest, Y-Linked

  • Nonobstructive Y-Linked Spermatogenic Failure

  • Spermatogenic Failure Y-Linked 2

  • Azoospermia Non-Obstructive Y-Linked

  • Non-Obstructive Azoospermia And Infertility

  • Oligospermia Non-Obstructive Y-Linked

  • Oligozoospermia Non-Obstructive Y-Linked

  • Spermatogenic Arrest Y-Linked

  • Spermatogenic Failure Nonobstructive Y-Linked

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma