1. Gene
  2. PCDHA4 - protocadherin alpha 4 Gene

PCDHA4 - protocadherin alpha 4 Gene

Homo sapiens

Also known as CNR1; CNRN1; CRNR1; PCDH-ALPHA4

Gene ID: 56144 | Gene type: protein coding

About PCDHA4

Cytogenetic location: 5q31.3 Genomic coordinates (GRCh38): 5:140,807,068-141,012,347 (from NCBI)

This gene has 5 transcripts (splice variants), 31 orthologues and 61 paralogues.

Summary

This gene is a member of the protocadherin alpha gene cluster, one of three related gene clusters tandemly linked on chromosome five that demonstrate an unusual genomic organization similar to that of B-cell and T-cell receptor gene clusters. The alpha gene cluster is composed of 15 cadherin superfamily genes related to the mouse CNR genes and consists of 13 highly similar and 2 more distantly related coding sequences. The tandem array of 15 N-terminal exons, or variable exons, are followed by downstream C-terminal exons, or constant exons, which are shared by all genes in the cluster. The large, uninterrupted N-terminal exons each encode six cadherin ectodomains while the C-terminal exons encode the cytoplasmic domain. These neural cadherin-like cell adhesion proteins are integral plasma membrane proteins that most likely play a critical role in the establishment and function of specific cell-cell connections in the brain. Alternative splicing has been observed and additional variants have been suggested but their full-length nature has yet to be determined. [provided by RefSeq, Jul 2008]

PCDHA4 Products(2)

mRNA Protein Name
NM_018907.4 NP_061730.1 protocadherin alpha-4 isoform 1 precursor
NM_031500.3 NP_113688.1 protocadherin alpha-4 isoform 2 precursor

PCDHA4 Protein Structure

Cadherin_2

Cadherin_2: Cadherin-like (29 - 111)

Cadherin

Cadherin: Cadherin domain (140 - 233)

Cadherin

Cadherin: Cadherin domain (247 - 341)

Cadherin

Cadherin: Cadherin domain (358 - 445)

Cadherin

Cadherin: Cadherin domain (460 - 556)

Cadherin

Cadherin: Cadherin domain (587 - 669)

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  • 947 a.a.
Protein Preferred Names Protein Names

protocadherin alpha-4

KIAA0345-like 10

Recombinant PCDHA4 Proteins

Cat. No. Product Name Accession Purity
HY-P79230 Protocadherin alpha 4 Protein, Human (CHO, His) NP_113688 (M1-N697) ≥95%

Orthologs Information

Species Symbol Source ID
Rattus norvegicus PCDHA4 RGD RGD:620337