Structure based development of novel specific inhibitors for cathepsin L and cathepsin S in vitro and in vivo

Specific inhibitors for Cathepsin L and Cathepsin S have been developed with the help of computer-graphic modeling based on the stereo-structure. The common fragment, N-(L-trans-carbamoyloxyrane-2-carbonyl)-phenylalanine-dimethyla mide, is required for specific inhibition of Cathepsin L. Seven novel inhibitors of the Cathepsin L Inhibitor Katunuma (CLIK) specifically inhibited Cathepsin L at a concentration of 10(-7) M in vitro, while almost no inhibition of cathepsins B, C, S and K was observed. Four of the CLIKs are stable, and showed highly selective inhibition for hepatic Cathepsin L in vivo. One of the CLIK inhibitors contains an aldehyde group, and specifically inhibits Cathepsin S at 10(-7) M in vitro.