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  3. Omeprazole

Omeprazole (H 16868) is an orally active H+,K+-ATPase inhibitor and a proton pump inhibitor. Omeprazole competitively inhibits CYP2C19, CYP3A4, and CYP2C9 activity. Omeprazole inhibits gastric acid secretion and can be used for acid-related gastrointestinal disorders. Omeprazole inhibits pancreatic cancer cell proliferation, induces apoptosis, autophagosome accumulation (elevated LC3-I and LC3-II levels), oxidative stress, and cytogenetic imbalance, modulates lysosomal transport, reduces inflammatory cytokines. Omeprazole alters small intestinal morphology and magnesium absorption, and induces gastric mucosa morphologic changes. Omeprazole aslo has neuroprotective and antibacterial effects.

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Omeprazole

Omeprazole Chemical Structure

CAS No. : 73590-58-6

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Customer Review

Based on 8 publication(s) in Google Scholar

Other Forms of Omeprazole:

Top Publications Citing Use of Products
  • Biological Activity

  • Purity & Documentation

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Description

Omeprazole (H 16868) is an orally active H+,K+-ATPase inhibitor and a proton pump inhibitor. Omeprazole competitively inhibits CYP2C19, CYP3A4, and CYP2C9 activity. Omeprazole inhibits gastric acid secretion and can be used for acid-related gastrointestinal disorders. Omeprazole inhibits pancreatic cancer cell proliferation, induces apoptosis, autophagosome accumulation (elevated LC3-I and LC3-II levels), oxidative stress, and cytogenetic imbalance, modulates lysosomal transport, reduces inflammatory cytokines. Omeprazole alters small intestinal morphology and magnesium absorption, and induces gastric mucosa morphologic changes. Omeprazole aslo has neuroprotective and antibacterial effects[1][2][3][4][5].

IC50 & Target[1][2][5]

CYP2C19

2.4-6.2 μM (Ki)

CYP2C9

16.4 μM (Ki)

CYP3A4

41.9 μM (Ki)

LC3-I

 

LC3-II

 

IL-1β

 

IL-6

 

Cellular Effect
Cell Line Type Value Description References
BXPC-3 IC50
14.8 μM
Compound: omeprazole
Inhibition of survival of human BxPC3 cells after 10 to 14 days by crystal violet staining-based colony formation assay
Inhibition of survival of human BxPC3 cells after 10 to 14 days by crystal violet staining-based colony formation assay
[PMID: 25513712]
Caco-2 IC50
17.7 μM
Compound: Omeprazole
TP_TRANSPORTER: inhibition of Digoxin transepithelial transport (basal to apical) (Digoxin: 5 uM) in Caco-2 cells
TP_TRANSPORTER: inhibition of Digoxin transepithelial transport (basal to apical) (Digoxin: 5 uM) in Caco-2 cells
[PMID: 11770010]
HEK293 EC50
14 μM
Compound: 1a
Agonist activity at recombinant BRS-3 receptor expressed in baculovirus-transduced HEK293 cells assessed as intracellular calcium mobilization by FLIPR assay
Agonist activity at recombinant BRS-3 receptor expressed in baculovirus-transduced HEK293 cells assessed as intracellular calcium mobilization by FLIPR assay
[PMID: 18818070]
HEK293 EC50
14000 nM
Compound: 1a
Agonist activity at recombinant BRS-3 receptor expressed in baculovirus-transduced HEK293 cells assessed as intracellular calcium mobilization by FLIPR assay
Agonist activity at recombinant BRS-3 receptor expressed in baculovirus-transduced HEK293 cells assessed as intracellular calcium mobilization by FLIPR assay
[PMID: 18818070]
HEK-293T IC50
25 μM
Compound: Omeprazole
Inhibition of recombinant human C-MYC/DDK-tagged ENGase expressed in HEK293T cells using heat inactivated bovine ribonuclease B as substrate pretreated for 15 mins followed by substrate addition after 90 mins by SDS-PAGE analysis
Inhibition of recombinant human C-MYC/DDK-tagged ENGase expressed in HEK293T cells using heat inactivated bovine ribonuclease B as substrate pretreated for 15 mins followed by substrate addition after 90 mins by SDS-PAGE analysis
[PMID: 28512024]
HepG2 IC50
>10 μM
Compound: 92125351
HARVARD: Cytotoxicity in HepG2 cell line
HARVARD: Cytotoxicity in HepG2 cell line
[PMID: 22586124]
HepG2 IC50
0.68 μM
Compound: 92125351
HARVARD: Inhibition of liver stage Plasmodium berghei infection in HepG2 cells
HARVARD: Inhibition of liver stage Plasmodium berghei infection in HepG2 cells
[PMID: 22586124]
HUVEC GI50
>100 μM
Compound: Omeprazole
Cytotoxicity against HUVEC cells
Cytotoxicity against HUVEC cells
[PMID: 31923859]
K562 GI50
>100 μM
Compound: Omeprazole
Antiproliferative activity against human K562 cells harboring MLL1
Antiproliferative activity against human K562 cells harboring MLL1
[PMID: 31923859]
L02 GI50
>100 μM
Compound: Omeprazole
Cytotoxicity against human L02 cells
Cytotoxicity against human L02 cells
[PMID: 31923859]
MOLM-13 GI50
34.1 μM
Compound: Omeprazole
Antiproliferative activity against human MOLM-13 cells harboring MLL1-AF9
Antiproliferative activity against human MOLM-13 cells harboring MLL1-AF9
[PMID: 31923859]
MV4-11 GI50
37.3 μM
Compound: Omeprazole
Antiproliferative activity against human MV4-11 cells harboring MLL1-AF4
Antiproliferative activity against human MV4-11 cells harboring MLL1-AF4
[PMID: 31923859]
Vero C1008 CC50
>40 μM
Compound: Omeprazole
Cytotoxicity (CC50) determination in Vero E6 cells measured by fluorescence (OD590nm)
Cytotoxicity (CC50) determination in Vero E6 cells measured by fluorescence (OD590nm)
10.1101/2020.04.03.023846
Vero C1008 EC50
17.06 μM
Compound: Omeprazole
Antiviral efficacy against SARS-CoV-2 (strain BavPat1) in Vero E6 cells assessed by inhibition of viral RNA replication measured by RT-PCR after 2 days
Antiviral efficacy against SARS-CoV-2 (strain BavPat1) in Vero E6 cells assessed by inhibition of viral RNA replication measured by RT-PCR after 2 days
10.1101/2020.04.03.023846
In Vitro

Omeprazole (15 min) competitively inhibits CYP2C9 activity in pooled human liver microsomes with a Ki of 16.4 μM[1].
Omeprazole (20 min) competitively inhibits CYP2C19 activity in pooled human liver microsomes with a Ki of 2.4-6.2 μM μM[1].
Omeprazole (15 min) does not significantly inhibit CYP2D6 activity in pooled human liver microsomes, with an IC50 >200 μM[1].
Omeprazole (15 min) competitively inhibits CYP3A4 activity in pooled human liver microsomes with a Ki of 41.9 μM[1].
Omeprazole (0-200 μg/mL; 4 days) inhibits proliferation of MiaPaCa-2, ASPC-1, Panc-1, Colo357, PancTu-1, and Panc89 human pancreatic cancer cell lines in a dose-dependent manner with IC50 values ranging from 9.1 to 42.4 μg/mL[2].
Omeprazole (80 μg/mL; 30 min-24 ) does not cause consistent intralysosomal pH changes in MiaPaCa-2 and ASPC-1 human pancreatic cancer cell lines, but increases acidity in ASPC-1 cells and decreases acidity in MiaPaCa-2 cells after 24 hours of incubation at 80 μg/mL[2].
Omeprazole (80-160 μg/mL; 24 h) induces accumulation of early autophagic markers (phagophores and autophagosomes) in MiaPaCa-2 and ASPC-1 human pancreatic cancer cell lines, and induces apoptosis in ASPC-1 cells[2].
Omeprazole (80 μg/mL; 24 h) accumulates intracellularly in MiaPaCa-2 and ASPC-1 human pancreatic cancer cell lines, and induces changes in fatty acid and phospholipid metabolism[2].
Omeprazole (80 μg/mL; 24 h) alters the distribution of lysosomal markers and reduces Golgi complex marker expression in MiaPaCa-2 human pancreatic cancer cells, indicating disruption of the lysosomal transport pathway without accumulating in lysosomes or the Golgi complex[2].
Omeprazole (40-160 μg/mL; 24 h) induces autophagy in a dose-dependent manner with elevated LC3-I and LC3-II levels, and impairs autophagosome turnover in MiaPaCa-2 and ASPC-1 human pancreatic cancer cell lines[2].
Omeprazole (80 μg/mL; 6-24 h) alters gene expression in ASPC-1 and MiaPaCa-2 human pancreatic cancer cell lines, downregulating bad and survivin and upregulating mdr-1 in ASPC-1 cells[2].
Omeprazole (80 μg/mL; 24 h) activates autophagy via upregulation of Atg12 in MiaPaCa-2 and ASPC-1 human pancreatic cancer cell lines, and upregulates pro-apoptotic Puma in ASPC-1 cells[2].
Omeprazole generate sulfone, sulfite
and hydroxy-omeprazole, compounds that can generate more oxidative damage [3].
Omeprazole exerts toxicogenic effects in Allium cepa plant cells, as well as Saccharomyces cerevisiae and murine Sarcoma 180 cells[3].
Omeprazole (200-300 mg/L) results in a
dose-dependent inhibition of E.faecalis at time zero[6].
Omeprazole (200 mg/L) inhibits S. aureus at both time zero and 2 h[6].

MedChemExpress (MCE) has not independently confirmed the accuracy of these methods. They are for reference only.

Cell Proliferation Assay[2]

Cell Line: MiaPaCa-2, ASPC-1, Panc-1, Colo357, PancTu-1, Panc89
Concentration: 0-200 μg/mL
Incubation Time: 4 days
Result: Inhibited cell proliferation in a dose-dependent manner, with IC50 values of 42.4 μg/mL (MiaPaCa-2), 11.2 μg/mL (ASPC-1), 31.8 μg/mL (Panc-1), 26.4 μg/mL (Colo357), 20.7 μg/mL (PancTu-1), and 9.1 μg/mL (Panc89).
Showed a mild growth-stimulatory hormetic effect in some cell lines at low concentrations.
Mitigated the hormetic growth stimulation induced by low-dose 5-fluorouracil (HY-90006) in ASPC-1, Panc-1, and PancTu-1 cells.
Showed additive effects with low-dose 5-fluorouracil in MiaPaCa-2 cells.
Showed antagonistic effects with low-dose 5-fluorouracil in Panc89 cells.
Showed additive or antagonistic interactions with gemcitabine.

Western Blot Analysis[2]

Cell Line: MiaPaCa-2, ASPC-1
Concentration: 40 μg/mL, 80 μg/mL, 160 μg/mL
Incubation Time: 24 h
Result: Caused a dose-dependent marked elevation of LC3-I and LC3-II fractions in both cell lines.

Real Time qPCR[2]

Cell Line: ASPC-1, MiaPaCa-2
Concentration: 80 μg/mL
Incubation Time: 6 h, 12 h, 18 h, 24 h
Result: Significantly downregulated pro-apoptotic bad mRNA in ASPC-1 cells after 24 hours.
Significantly downregulated pro-survival survivin mRNA in ASPC-1 cells after 24 hours.
Significantly upregulated mdr-1 mRNA in ASPC-1 cells after 24 hours.
Did not significantly alter mdr-1 mRNA expression in MiaPaCa-2 cells.
In Vivo

Omeprazole (20 mg/kg; s.c.; daily; 12-24 weeks) in male Sprague-Dawley rats induces small intestinal inflammation, villous atrophy, tight junction narrowing, and systemic magnesium deficiency with hypomagnesemia[4].
Omeprazole prevents Oxaliplatin (HY-17371)-induced peripheral neuropathy in Rattus norvegicus[5].
Omeprazole reduces the levels of the inflammatory cytokines, tumor necrosis factor-α, interleukin-1β, and interleukin-6, in sciatic nerve-ligated mice[5].

MedChemExpress (MCE) has not independently confirmed the accuracy of these methods. They are for reference only.

Animal Model: Sprague-Dawley (male, 9 weeks old at study initiation)[4]
Dosage: 20 mg/kg
Administration: s.c.; daily; 12 weeks; 24 weeks
Result: Decreased villous length and mucosa-to-serosa amplification ratio in duodenum, jejunum, and ileum compared to controls.
Increased duodenal crypt depth and width compared to controls.
Reduced the number of secretory granules per Paneth cell in duodenum, jejunum, and ileum after 24 weeks of treatment compared to controls.
Increased CD3+ intraepithelial lymphocytes and CD8+ intraepithelial lymphocytes compared to controls.
Reduced plasma Mg2+ levels to 0.64 mM after 12 weeks and 0.57 mM after 24 weeks compared to control level of 1.07 mmol/L.
Reduced urinary Mg2+ excretion compared to controls.
Increased fecal Mg2+ excretion after 24 weeks of treatment compared to controls.
Reduced bone and muscle Mg2+ content.
Molecular Weight

345.42

Formula

C17H19N3O3S

CAS No.
Appearance

Solid

Color

White to off-white

SMILES

O=S(C1=NC2=CC=C(OC)C=C2N1)CC3=NC=C(C)C(OC)=C3C

Shipping

Room temperature in continental US; may vary elsewhere.

Storage
Powder -20°C 3 years
4°C 2 years
In solvent -80°C 6 months
-20°C 1 month
Solvent & Solubility
In Vitro: 

DMSO : 100 mg/mL (289.50 mM; Need ultrasonic; Hygroscopic DMSO has a significant impact on the solubility of product, please use newly opened DMSO)

H2O : < 0.1 mg/mL (insoluble)

Preparing
Stock Solutions
Concentration Solvent Mass 1 mg 5 mg 10 mg
1 mM 2.8950 mL 14.4751 mL 28.9503 mL
5 mM 0.5790 mL 2.8950 mL 5.7901 mL
View the Complete Stock Solution Preparation Table

* Please refer to the solubility information to select the appropriate solvent. Once prepared, please aliquot and store the solution to prevent product inactivation from repeated freeze-thaw cycles.
Storage method and period of stock solution: -80°C, 6 months; -20°C, 1 month. When stored at -80°C, please use it within 6 months. When stored at -20°C, please use it within 1 month.

  • Molarity Calculator

  • Dilution Calculator

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In Vivo:

Select the appropriate dissolution method based on your experimental animal and administration route.

For the following dissolution methods, please ensure to first prepare a clear stock solution using an In Vitro approach and then sequentially add co-solvents:
To ensure reliable experimental results, the clarified stock solution can be appropriately stored based on storage conditions. As for the working solution for in vivo experiments, it is recommended to prepare freshly and use it on the same day.
The percentages shown for the solvents indicate their volumetric ratio in the final prepared solution. If precipitation or phase separation occurs during preparation, heat and/or sonication can be used to aid dissolution.

  • Protocol 1

    Add each solvent one by one:  10% DMSO    40% PEG300    5% Tween-80    45% Saline

    Solubility: ≥ 2.5 mg/mL (7.24 mM); Clear solution

    This protocol yields a clear solution of ≥ 2.5 mg/mL (saturation unknown).

    Taking 1 mL working solution as an example, add 100 μL DMSO stock solution (25.0 mg/mL) to 400 μL PEG300, and mix evenly; then add 50 μL Tween-80 and mix evenly; then add 450 μL Saline to adjust the volume to 1 mL.

    Preparation of Saline: Dissolve 0.9 g sodium chloride in ddH₂O and dilute to 100 mL to obtain a clear Saline solution.
  • Protocol 2

    Add each solvent one by one:  10% DMSO    90% (20% SBE-β-CD in Saline)

    Solubility: ≥ 2.5 mg/mL (7.24 mM); Clear solution

    This protocol yields a clear solution of ≥ 2.5 mg/mL (saturation unknown).

    Taking 1 mL working solution as an example, add 100 μL DMSO stock solution (25.0 mg/mL) to 900 μL 20% SBE-β-CD in Saline, and mix evenly.

    Preparation of 20% SBE-β-CD in Saline (4°C, storage for one week): 2 g SBE-β-CD powder is dissolved in 10 mL Saline, completely dissolve until clear.
In Vivo Dissolution Calculator
Please enter the basic information of animal experiments:

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Recommended: Prepare an additional quantity of animals to account for potential losses during experiments.
Please enter your animal formula composition:
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Recommended: Keep the proportion of DMSO in working solution below 2% if your animal is weak.
The co-solvents required include: DMSO, . All of co-solvents are available by MedChemExpress (MCE). , Tween 80. All of co-solvents are available by MedChemExpress (MCE).
Calculation results:
Working solution concentration: mg/mL
Method for preparing stock solution: mg drug dissolved in μL  DMSO (Stock solution concentration: mg/mL).
The concentration of the stock solution you require exceeds the measured solubility. The following solution is for reference only. If necessary, please contact MedChemExpress (MCE).
Method for preparing in vivo working solution for animal experiments: Take μL DMSO stock solution, add μL . μL , mix evenly, next add μL Tween 80, mix evenly, then add μL Saline.
 If the continuous dosing period exceeds half a month, please choose this protocol carefully.
Please ensure that the stock solution in the first step is dissolved to a clear state, and add co-solvents in sequence. You can use ultrasonic heating (ultrasonic cleaner, recommended frequency 20-40 kHz), vortexing, etc. to assist dissolution.
Purity & Documentation
References

Complete Stock Solution Preparation Table

* Please refer to the solubility information to select the appropriate solvent. Once prepared, please aliquot and store the solution to prevent product inactivation from repeated freeze-thaw cycles.
Storage method and period of stock solution: -80°C, 6 months; -20°C, 1 month. When stored at -80°C, please use it within 6 months. When stored at -20°C, please use it within 1 month.

Optional Solvent Concentration Solvent Mass 1 mg 5 mg 10 mg 25 mg
DMSO 1 mM 2.8950 mL 14.4751 mL 28.9503 mL 72.3757 mL
5 mM 0.5790 mL 2.8950 mL 5.7901 mL 14.4751 mL
10 mM 0.2895 mL 1.4475 mL 2.8950 mL 7.2376 mL
15 mM 0.1930 mL 0.9650 mL 1.9300 mL 4.8250 mL
20 mM 0.1448 mL 0.7238 mL 1.4475 mL 3.6188 mL
25 mM 0.1158 mL 0.5790 mL 1.1580 mL 2.8950 mL
30 mM 0.0965 mL 0.4825 mL 0.9650 mL 2.4125 mL
40 mM 0.0724 mL 0.3619 mL 0.7238 mL 1.8094 mL
50 mM 0.0579 mL 0.2895 mL 0.5790 mL 1.4475 mL
60 mM 0.0483 mL 0.2413 mL 0.4825 mL 1.2063 mL
80 mM 0.0362 mL 0.1809 mL 0.3619 mL 0.9047 mL
100 mM 0.0290 mL 0.1448 mL 0.2895 mL 0.7238 mL
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