COL4A3 - collagen type IV alpha 3 chain Gene
Also Known as ATS2; ATS3
Species: Homo sapiens
About COL4A3
This gene has 12 transcripts (splice variants), 121 orthologues, 37 paralogues and is associated with 9 phenotypes. Biased expression in kidney (RPKM 8.1), lung (RPKM 7.4) and 12 other tissues.
Summary
Type IV Collagen, the major structural component of basement membranes, is a multimeric protein composed of 3 alpha subunits. These subunits are encoded by 6 different genes, alpha 1 through alpha 6, each of which can form a triple helix structure with 2 Other subunits to form type IV Collagen. This gene encodes alpha 3. In the Goodpasture syndrome, autoantibodies bind to the Collagen molecules in the basement membranes of alveoli and glomeruli. The epitopes that elicit these autoantibodies are localized largely to the non-collagenous C-terminal domain of the protein. A specific kinase phosphorylates Amino acids in this same C-terminal region and the expression of this kinase is upregulated during pathogenesis. This gene is also linked to an autosomal recessive form of Alport syndrome. The mutations contributing to this syndrome are also located within the exons that encode this C-terminal region. Like the Other members of the type IV Collagen gene family, this gene is organized in a head-to-head conformation with another type IV Collagen gene so that each gene pair shares a common promoter. [provided by RefSeq, Jun 2010]
COL4A3 Products (1)
| mRNA | Protein | Name |
|---|---|---|
| NM_000091.5 | NP_000082.2 | collagen alpha-3(IV) chain precursor |
COL4A3 Protein Structure
Collagen: Collagen triple helix repeat (20 copies) (46 - 101)
Collagen: Collagen triple helix repeat (20 copies) (103 - 157)
Collagen: Collagen triple helix repeat (20 copies) (171 - 220)
Collagen: Collagen triple helix repeat (20 copies) (287 - 339)
Collagen: Collagen triple helix repeat (20 copies) (353 - 411)
Collagen: Collagen triple helix repeat (20 copies) (389 - 439)
Collagen: Collagen triple helix repeat (20 copies) (415 - 473)
Collagen: Collagen triple helix repeat (20 copies) (484 - 542)
Collagen: Collagen triple helix repeat (20 copies) (590 - 647)
Collagen: Collagen triple helix repeat (20 copies) (655 - 698)
Collagen: Collagen triple helix repeat (20 copies) (700 - 744)
Collagen: Collagen triple helix repeat (20 copies) (750 - 807)
Collagen: Collagen triple helix repeat (20 copies) (789 - 845)
Collagen: Collagen triple helix repeat (20 copies) (849 - 905)
Collagen: Collagen triple helix repeat (20 copies) (892 - 944)
Collagen: Collagen triple helix repeat (20 copies) (952 - 1008)
Collagen: Collagen triple helix repeat (20 copies) (998 - 1056)
Collagen: Collagen triple helix repeat (20 copies) (1064 - 1119)
Collagen: Collagen triple helix repeat (20 copies) (1119 - 1173)
Collagen: Collagen triple helix repeat (20 copies) (1178 - 1232)
Collagen: Collagen triple helix repeat (20 copies) (1292 - 1349)
Collagen: Collagen triple helix repeat (20 copies) (1379 - 1437)
C4: C-terminal tandem repeated domain in type 4 procollagen (1445 - 1552)
C4: C-terminal tandem repeated domain in type 4 procollagen (1556 - 1667)
- 0
- 300
- 600
- 900
- 1200
- 1500
- 1670 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
collagen alpha-3(IV) chain |
|
Recombinant COL4A3 Proteins
| Cat. No. | Nom du produit | Accession | Pureté |
|---|---|---|---|
| HY-P72148 | COL4A3 Protein, Human (His) | Q01955 (G1427-K1668) | ≥ 90%, as determined by reducing SDS-PAGE. |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Alport Syndrome 3, Autosomal Dominant |
|
|
| Alport Syndrome 2, Autosomal Recessive |
|
|
| Hematuria, Benign Familial |
|
|
| Autosomal Dominant Alport Syndrome |
|
|
| Autosomal Recessive Alport Syndrome |
|
|
| Alport Syndrome |
|
|
| Hereditary Hearing Loss And Deafness |
|
|
| Nephrotic Syndrome |
|
|
| Goodpasture Syndrome |
|
|
| Glomerulonephritis |
|
|
| X-Linked Alport Syndrome |
|
|
| Kidney Disease |
|
|
| Autoimmune Disease Of Urogenital Tract |
|
|
| Focal Segmental Glomerulosclerosis |
|
|
| Genetic Steroid-Resistant Nephrotic Syndrome |
|
|
| Anti-Basement Membrane Glomerulonephritis |
|
|
| Leiomyomatosis |
|
|
| Corneal Dystrophy, Posterior Polymorphous, 1 |
|
|
| End Stage Renal Disease |
|
|
| Corneal Dystrophy, Posterior Polymorphous, 3 |
|
|
| Keratoconus |
|
|
| Rapidly Progressive Glomerulonephritis |
|
|
| Pierson Syndrome |
|
|
| Deafness, Autosomal Dominant 4a |
|
|
| Autoimmune Glomerulonephritis |
|
|
| Nail-Patella Syndrome |
|
|
| Crescentic Glomerulonephritis |
|
|
| Acute Proliferative Glomerulonephritis |
|
|
| Porencephaly |
|
|
| Familial Nephrotic Syndrome |
|
|
| Corneal Ectasia |
|
|
| Irregular Astigmatism |
|
|
| Corneal Dystrophy, Posterior Polymorphous, 2 |
|
|
| Papillorenal Syndrome |
|
|
| Retinal Arteries, Tortuosity Of |
|
|
| 3-Methylcrotonyl-Coa Carboxylase 2 Deficiency |
|
|
| Colorectal Cancer |
|
|
| Lung Cancer |
|
|
| Inner Ear Disease |
|
|
| Auditory System Disease |
|
|
| Cataract |
|
|
| Fuchs' Endothelial Dystrophy |
|
|
| Preterm Premature Rupture Of The Membranes |
|
|
| Stickler Syndrome |
|
|
| Cakut |
|
|
| Autosomal Dominant Polycystic Kidney Disease |
|
|
| Sensorineural Hearing Loss |
|
|
| Polycystic Kidney Disease |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Rattus norvegicus | COL4A3 | RGD | RGD:71085 |
| Bos taurus | COL4A3 | VGNC | VGNC:55339 |
| Canis familiaris | COL4A3 | VGNC | VGNC:59075 |
| Felis catus | COL4A3 | VGNC | VGNC:107515 |
| Mus musculus | COL4A3 | MGD | MGI:104688 |
| Macaca mulatta | COL4A3 | VGNC | VGNC:81375 |
| Others | COL4A3 | NCBI |