APOBEC3A - apolipoprotein B mRNA editing enzyme catalytic subunit 3A Gene
Also Known as A3A; ARP3; PHRBN; bK150C2.1
Species: Homo sapiens
About APOBEC3A
This gene has 5 transcripts (splice variants), 1 gene allele, 26 orthologues and 9 paralogues. Biased expression in bone marrow (RPKM 38.8), appendix (RPKM 13.8) and 5 other tissues.
Summary
This gene is a member of the cytidine deaminase gene family. It is one of seven related genes or pseudogenes found in a cluster, thought to result from gene duplication, on chromosome 22. Members of the cluster encode proteins that are structurally and functionally related to the C to U RNA-editing cytidine deaminase APOBEC1. The protein encoded by this gene lacks the zinc binding activity of Other family members. The protein plays a role in immunity, by restricting transmission of foreign DNA such as viruses. One mechanism of foreign DNA restriction is deamination of foreign double-stranded DNA cytidines to uridines, which leads to DNA degradation. However, Other mechanisms are also thought to be involved, as anti-viral effect is not dependent on deaminase activity. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2012]
APOBEC3A Products (2)
| mRNA | Protein | Name |
|---|---|---|
| NM_001270406.2 | NP_001257335.1 | DNA dC->dU-editing enzyme APOBEC-3A isoform b |
| NM_145699.4 | NP_663745.1 | DNA dC->dU-editing enzyme APOBEC-3A isoform a |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables cytidine deaminase activity |
IDA
IDA: Inferred from direct assay
|
16527742 | GOA |
| enables cytidine deaminase activity |
IMP
IMP: Inferred from mutant phenotype
|
20062055 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
22915799 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in clearance of foreign intracellular DNA |
IDA
IDA: Inferred from direct assay
|
20062055 | GOA |
| involved in defense response to virus |
IDA
IDA: Inferred from direct assay
|
21123384 | GOA |
| involved in innate immune response |
IDA
IDA: Inferred from direct assay
|
21123384 | GOA |
| involved in negative regulation of viral genome replication |
IDA
IDA: Inferred from direct assay
|
16527742 | GOA |
| involved in positive regulation of gene expression via chromosomal CpG island demethylation |
IDA
IDA: Inferred from direct assay
|
21496894 | GOA |
| involved in retrotransposon silencing |
IDA
IDA: Inferred from direct assay
|
16527742 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in cytoplasm |
IDA
IDA: Inferred from direct assay
|
16527742 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
16527742 | GOA |
APOBEC3A Protein Structure
APOBEC_C: APOBEC-like C-terminal domain (133 - 186)
- 0
- 100
- 199 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
DNA dC->dU-editing enzyme APOBEC-3A |
|
Recombinant APOBEC3A Proteins
| Cat. No. | Product Name | Accession | Purity |
|---|---|---|---|
| HY-P72080 | APOBEC3A Protein, Human (His-SUMO) | P31941-1 (M1-N199) | ≥ 90%, as determined by reducing SDS-PAGE. |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Colorectal Adenocarcinoma |
|
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| Bone Leiomyosarcoma |
|
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| Human T-Cell Leukemia Virus Type 1 |
|
|
| Plantar Wart |
|
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| Epiphyseal Dysplasia, Multiple, 3 |
|
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| Psoriasis |
|