Discovery of 8-Membered Ring Sulfonamides as Inhibitors of Oncogenic Mutant Isocitrate Dehydrogenase 1

  • ACS Med Chem Lett. 2016 Aug 18;7(10):944-949. doi: 10.1021/acsmedchemlett.6b00264.
Jason M Law  1 Sebastian C Stark  2 Ke Liu  2 Norah E Liang  1 Mahmud M Hussain  3 Matthias Leiendecker  1 Daisuke Ito  2 Oscar Verho  1 Andrew M Stern  2 Stephen E Johnston  2 Yan-Ling Zhang  2 Gavin P Dunn  4 Alykhan F Shamji  2 Stuart L Schreiber  3
Affiliations
  • 1. Center for the Science of Therapeutics, Broad Institute, Cambridge, Massachusetts 02142, United States; Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138, United States.
  • 2. Center for the Science of Therapeutics, Broad Institute , Cambridge, Massachusetts 02142, United States.
  • 3. Center for the Science of Therapeutics, Broad Institute, Cambridge, Massachusetts 02142, United States; Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138, United States; Howard Hughes Medical Institute, Cambridge, Massachusetts 02138, United States.
  • 4. Department of Neurological Surgery, Washington Univeristy School of Medicine , St. Louis, Missouri 63110, United States.
Abstract

Evidence suggests that specific mutations of isocitrate dehydrogenases 1 and 2 (IDH1/2) are critical for the initiation and maintenance of certain tumor types and that inhibiting these mutant Enzymes with small molecules may be therapeutically beneficial. In order to discover mutant allele-selective IDH1 inhibitors with chemical features distinct from existing probes, we screened a collection of small molecules derived from diversity-oriented synthesis. The assay identified compounds that inhibit the IDH1-R132H mutant allele commonly found in glioma. Here, we report the discovery of a potent (IC50 = 50 nM) series of IDH1-R132H inhibitors having 8-membered ring sulfonamides as exemplified by the compound BRD2879. The inhibitors suppress (R)-2-hydroxyglutarate production in cells without apparent toxicity. Although the solubility and pharmacokinetic properties of the specific inhibitor BRD2879 prevent its use in vivo, the scaffold presents a validated starting point for the synthesis of future IDH1-R132H inhibitors having improved pharmacological properties.

Keywords
2-hydroxyglutarate; AML; BRD2879; allele-selective probe; cancer; diversity-oriented synthesis; glioma; high-throughput screening; isocitrate dehydrogenase; small-molecule probe.
Products