ABCB9 - ATP binding cassette subfamily B member 9 Gene
Also Known as TAPL; EST122234
Species: Homo sapiens
About ABCB9
This gene has 20 transcripts (splice variants), 209 orthologues and 10 paralogues. Broad expression in testis (RPKM 3.4), brain (RPKM 1.2) and 23 other tissues.
Summary
The membrane-associated protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the MDR/TAP subfamily. Members of the MDR/TAP subfamily are involved in multidrug resistance as well as antigen presentation. This family member functions in the translocation of peptides from the cytosol into the lysosomal lumen. Alternative splicing of this gene results in distinct isoforms which are likely to have different substrate specificities. [provided by RefSeq, Jul 2011]
ABCB9 Products (5)
| mRNA | Protein | Name |
|---|---|---|
| NM_001243013.2 | NP_001229942.1 | ABC-type oligopeptide transporter ABCB9 isoform 6 |
| NM_001243014.2 | NP_001229943.1 | ABC-type oligopeptide transporter ABCB9 isoform 5 |
| NM_019624.4 | NP_062570.1 | ABC-type oligopeptide transporter ABCB9 isoform 2 |
| NM_019625.4 | NP_062571.1 | ABC-type oligopeptide transporter ABCB9 isoform 1 |
| NM_203444.4 | NP_982269.2 | ABC-type oligopeptide transporter ABCB9 isoform 4 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables ABC-type oligopeptide transporter activity |
IDA
IDA: Inferred from direct assay
|
15863492 | GOA |
| enables ABC-type peptide transporter activity |
IDA
IDA: Inferred from direct assay
|
17977821 | GOA |
| enables ATP binding |
IDA
IDA: Inferred from direct assay
|
15863492 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
21194361 | GOA |
| enables protein homodimerization activity |
IDA
IDA: Inferred from direct assay
|
18434309 | GOA |
| enables protein homodimerization activity |
IPI
IPI: Inferred from physical interaction
|
18952056 | GOA |
| enables transmembrane transporter activity |
IDA
IDA: Inferred from direct assay
|
18434309 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| NOT involved in antigen processing and presentation of peptide antigen via MHC class I |
IDA
IDA: Inferred from direct assay
|
17977821 | GOA |
| involved in peptide metabolic process |
IDA
IDA: Inferred from direct assay
|
25646430 | GOA |
| involved in peptide transport |
IDA
IDA: Inferred from direct assay
|
15863492 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| NOT located in early endosome |
IDA
IDA: Inferred from direct assay
|
17977821 | GOA |
| NOT located in endoplasmic reticulum |
IDA
IDA: Inferred from direct assay
|
17977821 | GOA |
| located in endoplasmic reticulum membrane |
IDA
IDA: Inferred from direct assay
|
1101155 | GOA |
| located in lysosomal membrane |
IDA
IDA: Inferred from direct assay
|
10748049 | GOA |
| located in lysosome |
IDA
IDA: Inferred from direct assay
|
22641697 | GOA |
| located in membrane |
IDA
IDA: Inferred from direct assay
|
18434309 | GOA |
ABCB9 Protein Structure
ABC_membrane: ABC transporter transmembrane region (190 - 451)
ABC_tran: ABC transporter (522 - 671)
- 0
- 200
- 400
- 600
- 766 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
ABC-type oligopeptide transporter ABCB9 |
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Bos taurus | ABCB9 | VGNC | VGNC:25467 |
| Rattus norvegicus | ABCB9 | RGD | RGD:620254 |
| Felis catus | ABCB9 | VGNC | VGNC:80417 |
| Mus musculus | ABCB9 | MGD | MGI:1861729 |
| Canis familiaris | ABCB9 | VGNC | VGNC:97182 |
| Macaca mulatta | ABCB9 | VGNC | VGNC:81341 |
| Others | ABCB9 | NCBI |