1. Gene
  2. TAF5 - TATA-box binding protein associated factor 5 Gene

TAF5 - TATA-box binding protein associated factor 5 Gene

Homo sapiens

Also known as TAF2D; TAFII100; TAFII-100; TAF(II)100

Gene ID: 6877 | Gene type: protein coding

About TAF5

Cytogenetic location: 10q24.33 Genomic coordinates (GRCh38): 10:103,367,976-103,389,065 (from NCBI)

This gene has 10 transcripts (splice variants), 208 orthologues and 1 paralogue. Broad expression in testis (RPKM 8.2), lymph node (RPKM 2.6) and 24 other tissues.

Summary

Initiation of transcription by RNA polymerase II requires the activities of more than 70 polypeptides. The protein that coordinates these activities is transcription factor IID (TFIID), which binds to the core promoter to position the polymerase properly, serves as the scaffold for assembly of the remainder of the transcription complex, and acts as a channel for regulatory signals. TFIID is composed of the TATA-binding protein (TBP) and a group of evolutionarily conserved proteins known as TBP-associated factors or TAFs. TAFs may participate in basal transcription, serve as coactivators, function in promoter recognition or modify general transcription factors (GTFs) to facilitate complex assembly and transcription initiation. This gene encodes an integral subunit of TFIID associated with all transcriptionally competent forms of that complex. This subunit interacts strongly with two TFIID subunits that show similarity to histones H3 and H4, and it may participate in forming a nucleosome-like core in the TFIID complex. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2015]

TAF5 Products(2)

mRNA Protein Name
NM_006951.5 NP_008882.2 transcription initiation factor TFIID subunit 5 isoform 1
NM_139052.3 NP_620640.1 transcription initiation factor TFIID subunit 5 isoform 2

TAF5 Protein Structure

TFIID_NTD2

TFIID_NTD2: WD40 associated region in TFIID subunit, NTD2 domain (202 - 337)

WD40

WD40: WD domain, G-beta repeat (472 - 498)

WD40

WD40: WD domain, G-beta repeat (536 - 571)

WD40

WD40: WD domain, G-beta repeat (576 - 612)

WD40

WD40: WD domain, G-beta repeat (618 - 655)

WD40

WD40: WD domain, G-beta repeat (659 - 697)

WD40

WD40: WD domain, G-beta repeat (704 - 739)

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Protein Preferred Names Protein Names

transcription initiation factor TFIID subunit 5

TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa

Orthologs Information

Species Symbol Source ID
Canis familiaris TAF5 VGNC VGNC:47083
Macaca mulatta TAF5 VGNC VGNC:78092
Mus musculus TAF5 MGD MGI:2442144
Felis catus TAF5 VGNC VGNC:65933
Rattus norvegicus TAF5 RGD RGD:1311332
Bos taurus TAF5 VGNC VGNC:35576