Mecp2 - methyl CpG binding protein 2 Gene
Also Known as Mbd5; WBP10; 1500041B07Rik; D630021H01Rik
Species: Mus musculus
Summary
Enables several functions, including nucleic acid binding activity; promoter-specific chromatin binding activity; and transcription corepressor activity. Involved in several processes, including negative regulation of smooth muscle cell differentiation; negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation; and positive regulation of histone H3-K9 trimethylation. Acts upstream of or within several processes, including glycerolipid metabolic process; nervous system development; and regulation of gene expression. Located in cytosol; heterochromatin; and nucleus. Is expressed in several structures, including alimentary system; early conceptus; nervous system; paraxial mesenchyme; and sensory organ. Used to study Rett syndrome. Human ortholog(s) of this gene implicated in Rett syndrome; X-linked intellectual disability-psychosis-macroorchidism syndrome; autistic disorder; severe congenital encephalopathy due to MECP2 mutation; and syndromic X-linked intellectual disability Lubs type. Orthologous to human MECP2 (methyl-CpG binding protein 2). [provided by Alliance of Genome Resources, Apr 2022]
Mecp2 Products (2)
| mRNA | Protein | Name |
|---|---|---|
| NM_001081979.2 | NP_001075448.1 | methyl-CpG-binding protein 2 isoform 1 |
| NM_010788.4 | NP_034918.1 | methyl-CpG-binding protein 2 isoform 2 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables DNA binding |
IDA
IDA: Inferred from direct assay
|
18511691 | MGI |
| enables chromatin binding |
IDA
IDA: Inferred from direct assay
|
15608638 | MGI |
| enables double-stranded methylated DNA binding |
IDA
IDA: Inferred from direct assay
|
14593184 | MGI |
| enables histone reader activity |
IDA
IDA: Inferred from direct assay
|
18511691 | MGI |
| enables histone reader activity |
IMP
IMP: Inferred from mutant phenotype
|
17108082 | MGI |
| enables mRNA binding |
IDA
IDA: Inferred from direct assay
|
15342650 | MGI |
| enables methyl-CpG binding |
IDA
IDA: Inferred from direct assay
|
15342650 | MGI |
| enables promoter-specific chromatin binding |
IDA
IDA: Inferred from direct assay
|
16782889 | MGI |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
15696166 | MGI |
| enables siRNA binding |
IDA
IDA: Inferred from direct assay
|
15342650 | MGI |
| enables transcription corepressor activity |
IDA
IDA: Inferred from direct assay
|
25722434 | MGI |
| enables transcription factor binding |
IPI
IPI: Inferred from physical interaction
|
14593184 | MGI |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in cytoplasm |
IDA
IDA: Inferred from direct assay
|
17546630 | MGI |
| located in cytosol |
IDA
IDA: Inferred from direct assay
|
15939091 | MGI |
| located in heterochromatin |
IDA
IDA: Inferred from direct assay
|
14519686 | MGI |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
11809720 | MGI |
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
methyl-CpG-binding protein 2 |
|
Mecp2 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
Mecp2 | Q9Z2D6 | Smarca4 | Mus musculus | Q3TKT4 | 19602036 | |
|
Intra
|
Mecp2 | Q9Z2D6 | Smarca4 | Mus musculus | Q3TKT4 | 24270455 | |
|
Intra
|
Mecp2 | Q9Z2D6 | Smc1a | Mus musculus | Q9CU62 | 20159591 | |
|
Intra
|
Mecp2 | Q9Z2D6 | Smc3 | Mus musculus | Q9CW03 | 20159591 | |
|
Intra
|
Mecp2 | Q9Z2D6 | Atrx | Mus musculus | Q61687 | 24270455 | |
|
Intra
|
Mecp2 | Q9Z2D6 | Atrx | Mus musculus | Q61687 | 20159591 | |
|
Intra
|
Mecp2 | Q9Z2D6 | Hdac3 | Mus musculus | O88895 | 23770565 | |
|
Intra
|
Mecp2 | Q9Z2D6 | Hdac3 | Mus musculus | O88895 | 23770565 | |
|
Intra
|
Mecp2 | Q9Z2D6 | Sin3a | Mus musculus | Q60520 | 19602036 | |
|
Intra
|
Mecp2 | Q9Z2D6 | Sin3a | Mus musculus | Q60520 | 23770565 | |
|
Intra
|
Mecp2 | Q9Z2D6 | Sin3a | Mus musculus | Q60520 | 23770565 | |
|
Intra
|
Mecp2 | Q9Z2D6 | Smarca2 | Mus musculus | O35846 | 15696166 | |
|
Intra
|
Mecp2 | Q9Z2D6 | Sp3 | Mus musculus | O70494 | 20385708 |