CL-NC
CL-NC is a chemiluminescent probe used for in vivo imaging of N-methyl-D-aspartate receptors (NMDARs), and its detection mechanism relies on bioorthogonal activation achieved via a tetrazine-triggered click-to-release reaction. The isonitrile group of CL-NC undergoes a click reaction with tetrazine, followed by hydrolysis and β-elimination to release a phenoxide anion, which induces the departure of adamantane and generates chemiluminescence. CL-NC has a maximum absorption wavelength of approximately 425 nm, a maximum fluorescence emission wavelength of approximately 670 nm, and a maximum chemiluminescence emission wavelength of 710 nm. When used in combination with Tz-IFDL (HY-D3369), an NMDAR ligand conjugated with tetrazine, CL-NC enables targeted imaging of NMDARs in living cells, as well as in the brain and spinal cord of living mice.
For research use only. We do not sell to patients.
- CAS No.: 3114128-41-2
- Formula: C36H33N3O5
- Molecular Weight:587.66
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Storage:
Please store the product under the recommended conditions in the Certificate of Analysis.
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Biological Activity
Description
IC50 & Target
[1]|
NMDA Receptor |
In Vitro
Guide
(The following is our recommended protocol. This protocol is for guidance only and should be modified according to your specific needs).
1. Stock Solution Preparation
1.1 Solvent: DMSO/PBS buffer.
1.2 Concentration recommendation: 1 mM.
2. Working Solution Preparation
2.1 Diluent: PBS buffer with DMSO.
2.2 Working concentration: 50 µM; 100 µM.
2.3 Note: Adjust working solution concentration as needed; prepare fresh before use.
3. Staining Procedure
3.1 Sample type:[1]
3.1.1 Adherent cells: HT22, Bend.3, HEK293, AML-12, H9C2, HeLa cells.
3.1.2 In vivo samples: Murine intracerebral and intraspinal tissues.
3.2 Incubation conditions:
3.2.1 Incubate adherent cells with Tz-IFDL (HY-D3369) (50 µM) at 37°C for 30 min.
3.2.2 After washing, incubate adherent cells with CL-NC (50 µM) at 37°C for 3 h.
3.2.3 For in vivo imaging, administer Tz-IFDL via intracranial/intrathecal injection 1 h prior to CL-NC injection.
3.3 Washing steps:
3.3.1 Wash adherent cells with PBS buffer after Tz-IFDL incubation.
4. Controls
4.1 Negative controls:
4.1.1 Adherent cells: NR2B-knockdown cells, NR2B-null cell lines, cells treated with Pre-NC instead of CL-NC, cells treated with Tz-IFDL plus competitive Ifenprodil (HY-12882).
4.1.2 In vivo: Mice treated with tetrazine-free compound followed by CL-NC; mice treated with Tz-Br followed by CL-NC; mice pre-injected with Ifenprodil before probe administration.
4.2 Positive control validates experimental system; blank control excludes reagent fluorescence interference.
5. Detection & Analysis
5.1 Instrument: Chemiluminescence imaging system
5.1.1 Emission wavelength: 710 nm.
5.2 Result analysis:
5.2.1 Fluorescence intensity changes: OFF-ON chemiluminescence signal triggered by bioorthogonal reaction between CL-NC and tetrazine-conjugated ligand; peak intensity at ~3.5 h for CL-NC/Tz-Br system, ~3 h for in vivo imaging; half-life of 13.4 h for CL-NC/Tz-Br system, 8 h for CL-NC/Tz-IFDL system.
5.2.2 Fluorescence localization: Intracerebral and intraspinal regions in mice; cell surface of NR2B-expressing cells.
5.2.3 Color changes: Deep-red/near-infrared chemiluminescence.
5.2.4 The chemiluminescence intensity of wild-type mice was higher than that of Alzheimer's disease model mice (reflecting a decrease in NMDAR expression levels); higher intensity is observed in NR2B-expressing cells compared to NR2B-null/knockdown cells.
MedChemExpress (MCE) has not independently confirmed the accuracy of these methods. They are for reference only. Further protocols information, click here.
Chemical Information
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CAS No. 3114128-41-2
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Molecular Weight 587.66
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Formula C36H33N3O5
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SMILES
COC1(C2([C@@H]3C[C@H]4C[C@H](C[C@@H]2C4)C3)OO1)C5=CC(OCCC[N+]#[C-])=CC=C5/C=C/C6=C/C(C(C=CC=C7)=C7O6)=C(C#N)/C#N
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Shipping
Room temperature in continental US; may vary elsewhere.
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Storage
Please store the product under the recommended conditions in the Certificate of Analysis.
Protocols
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Bioluminescent/Fluorescent Imaging Xenograft
Bioluminescent and fluorescent imaging xenograft models use tumor cells engineered to express optical reporters so tumor engraftment, growth, dissemination, and treatment response can be monitored longitudinally in living animals and validated ex vivo. Bioluminescence imaging usually measures luciferase activity after substrate administration and is commonly used as a surrogate for viable reporter-expressing tumor burden, while fluorescence imaging measures reporter or probe emission and can support tumor localization, ex vivo confirmation, or complementary multimodal analysis.
Purity & Documentation
References
Calculators
Concentration (start) × Volume (start) = Concentration (final) × Volume (final)