DFFB - DNA fragmentation factor subunit beta Gene
Also Known as CAD; CPAN; DFF2; DFF40; DFF-40
Species: Homo sapiens
About DFFB
This gene has 11 transcripts (splice variants) and 205 orthologues. Ubiquitous expression in duodenum (RPKM 1.4), spleen (RPKM 1.3) and 25 other tissues.
Summary
Apoptosis is a cell death process that removes toxic and/or useless cells during mammalian development. The apoptotic process is accompanied by shrinkage and fragmentation of the cells and nuclei and degradation of the chromosomal DNA into nucleosomal units. DNA fragmentation factor (DFF) is a heterodimeric protein of 40-kD (DFFB) and 45-kD (DFFA) subunits. DFFA is the substrate for Caspase-3 and triggers DNA fragmentation during Apoptosis. DFF becomes activated when DFFA is cleaved by Caspase-3. The cleaved fragments of DFFA dissociate from DFFB, the active component of DFF. DFFB has been found to trigger both DNA fragmentation and chromatin condensation during Apoptosis. Alternatively spliced transcript variants encoding distinct isoforms have been found for this gene but the biological validity of some of these variants has not been determined. [provided by RefSeq, Sep 2013]
DFFB Products (4)
| mRNA | Protein | Name |
|---|---|---|
| NM_001282669.2 | NP_001269598.1 | DNA fragmentation factor subunit beta isoform 1 |
| NM_001320132.2 | NP_001307061.1 | DNA fragmentation factor subunit beta isoform 4 |
| NM_001320136.2 | NP_001307065.1 | DNA fragmentation factor subunit beta isoform 5 |
| NM_004402.4 | NP_004393.1 | DNA fragmentation factor subunit beta isoform 2 |
| Molecular Function GO Annotation | Evidence | Verweise | Source |
|---|---|---|---|
| enables DNA nuclease activity |
IMP
IMP: Inferred from mutant phenotype
|
19944011 | GOA |
| enables disordered domain specific binding |
IPI
IPI: Inferred from physical interaction
|
11371636 | GOA |
| enables enzyme binding |
IPI
IPI: Inferred from physical interaction
|
10959840 | GOA |
| enables identical protein binding |
IPI
IPI: Inferred from physical interaction
|
11371636 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
11371636 | GOA |
| enables protein domain specific binding |
IPI
IPI: Inferred from physical interaction
|
19944011 | GOA |
| Biological Process GO Annotation | Evidence | Verweise | Source |
|---|---|---|---|
| involved in DNA catabolic process |
IMP
IMP: Inferred from mutant phenotype
|
19944011 | GOA |
| acts upstream of or within apoptotic DNA fragmentation |
IDA
IDA: Inferred from direct assay
|
15572351 | GOA |
| involved in apoptotic DNA fragmentation |
IDA
IDA: Inferred from direct assay
|
22253444 | GOA |
| involved in apoptotic chromosome condensation |
IDA
IDA: Inferred from direct assay
|
10959840 | GOA |
| involved in negative regulation of apoptotic DNA fragmentation |
IDA
IDA: Inferred from direct assay
|
11371636 | GOA |
| Cellular Component GO Annotation | Evidence | Verweise | Source |
|---|---|---|---|
| located in chromatin |
IDA
IDA: Inferred from direct assay
|
19882353 | GOA |
| located in cytosol |
IDA
IDA: Inferred from direct assay
|
9108473 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
10959840 | GOA |
| part of protein-containing complex |
IDA
IDA: Inferred from direct assay
|
11371636 | GOA |
DFFB Protein Structure
CIDE-N: CIDE-N domain (4 - 79)
DFF40: DNA fragmentation factor 40 kDa (100 - 323)
- 0
- 100
- 200
- 300
- 338 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
DNA fragmentation factor subunit beta |
|
DFFB Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | Verweise |
|---|---|---|---|---|---|---|---|
|
Intra
|
DFFB | O76075 | DFFA | Homo sapiens | O00273 | 33961781 | |
|
Intra
|
DFFB | O76075 | DFFA | Homo sapiens | O00273 | 32296183 | |
|
Intra
|
DFFB | O76075 | DFFA | Homo sapiens | O00273 | 32296183 | |
|
Intra
|
DFFB | O76075 | DFFA | Homo sapiens | O00273 | 9108473 |
DFFB Antibodies
| Art. -Nr. | Produktname | Anwendung | Reactivity |
|---|---|---|---|
| HY-P83871 | DFFB Antibody (YA3568) | IHC-P, ICC/IF, FC, ELISA | Human |
| HY-P83871A | DFFB Antibody (YA3568)(PBS only) | IHC-P, ICC/IF, FC, ELISA | Human |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Huntington Disease |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Mus musculus | DFFB | MGD | MGI:1196287 |
| Bos taurus | DFFB | VGNC | VGNC:28018 |
| Rattus norvegicus | DFFB | RGD | RGD:620335 |
| Macaca mulatta | DFFB | VGNC | VGNC:99891 |
| Felis catus | DFFB | VGNC | VGNC:61454 |
| Canis familiaris | DFFB | VGNC | VGNC:39910 |
| Others | DFFB | NCBI |