MKRN1 - makorin ring finger protein 1 Gene
Also Known as RNF61
Species: Homo sapiens
About MKRN1
This gene has 16 transcripts (splice variants), 129 orthologues and 2 paralogues. Ubiquitous expression in bone marrow (RPKM 50.0), testis (RPKM 49.4) and 25 other tissues.
Summary
This gene encodes a protein that belongs to a novel class of zinc finger proteins. The encoded protein functions as a transcriptional co-regulator, and as an E3 ubiquitin Ligase that promotes the ubiquitination and proteasomal degradation of target proteins. The protein encoded by this gene is thought to regulate RNA polymerase II-catalyzed transcription. Substrates for this protein's E3 ubiquitin Ligase activity include the capsid protein of the West Nile virus and the catalytic subunit of the Telomerase ribonucleoprotein. This protein controls cell cycle arrest and Apoptosis by regulating p21, a cell cycle regulator, and the tumor suppressor protein p53. Pseudogenes of this gene are present on chromosomes 1, 3, 9, 12 and 20, and on the X chromosome. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Apr 2014]
MKRN1 Products (3)
| mRNA | Protein | Name |
|---|---|---|
| NM_001145125.2 | NP_001138597.1 | E3 ubiquitin-protein ligase makorin-1 isoform 2 |
| NM_001291663.2 | NP_001278592.1 | E3 ubiquitin-protein ligase makorin-1 isoform 3 |
| NM_013446.4 | NP_038474.2 | E3 ubiquitin-protein ligase makorin-1 isoform 1 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
19536131 | GOA |
| enables ubiquitin protein ligase activity |
IDA
IDA: Inferred from direct assay
|
19536131 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in protein polyubiquitination |
IDA
IDA: Inferred from direct assay
|
19536131 | GOA |
MKRN1 Protein Structure
zf-CCCH: Zinc finger C-x8-C-x5-C-x3-H type (and similar) (57 - 80)
zf-CCCH: Zinc finger C-x8-C-x5-C-x3-H type (and similar) (88 - 110)
zf-CCCH: Zinc finger C-x8-C-x5-C-x3-H type (and similar) (210 - 233)
zf-C3HC4: Zinc finger, C3HC4 type (RING finger) (281 - 334)
- 0
- 100
- 200
- 300
- 400
- 482 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
E3 ubiquitin-protein ligase makorin-1 |
|
MKRN1 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
MKRN1 | Q9UHC7 | BYSL | Homo sapiens | Q13895 | 32296183 | |
|
Intra
|
MKRN1 | Q9UHC7 | TP53 | Homo sapiens | P04637 | 19536131 | |
|
Intra
|
MKRN1 | Q9UHC7 | CDKN1A | Homo sapiens | P38936 | 19536131 | |
|
Intra
|
MKRN1 | Q9UHC7 | UBE2D4 | Homo sapiens | Q9Y2X8 | 32296183 |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| West Nile Virus |
|
|
| Cerebellar Astrocytoma |
|
|
| Pilomyxoid Astrocytoma |
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Rattus norvegicus | MKRN1 | RGD | RGD:1303251 |
| Mus musculus | MKRN1 | MGD | MGI:1859353 |
| Bos taurus | MKRN1 | VGNC | VGNC:107229 |
| Macaca mulatta | MKRN1 | VGNC | VGNC:81476 |
| Felis catus | MKRN1 | VGNC | VGNC:80625 |
| Others | MKRN1 | NCBI |