1. Gene
  2. Prkdc - protein kinase, DNA activated, catalytic polypeptide Gene

Prkdc - protein kinase, DNA activated, catalytic polypeptide Gene

Mus musculus

Also known as p460; scid; slip; DNAPK; DNPK1; HYRC1; XRCC7; dxnph; DOXNPH; DNAPDcs; DNA-PKcs

Gene ID: 19090 | Gene type: protein coding

About Prkdc

Chromosome 16: 15,455,730-15,660,099 forward strand.GRCm39:CM001009.3

This gene has 2 transcripts (splice variants), 188 orthologues, 5 paralogues and is associated with 159 phenotypes. Ubiquitous expression in CNS E11.5 (RPKM 1.5), frontal lobe adult (RPKM 1.2) and 27 other tissues.

Summary

Enables DNA-dependent protein kinase activity; double-stranded DNA binding activity; and Enzyme binding activity. Involved in several processes, including regulation of cellular protein metabolic process; regulation of hematopoietic stem cell differentiation; and regulation of hemopoiesis. Acts upstream of or within several processes, including DNA metabolic process; ectopic germ cell programmed cell death; and immune system development. Located in nucleus. Is expressed in several structures, including central nervous system; neural retina; and thymus primordium. Used to study severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, Nk cell-positive. Human ortholog(s) of this gene implicated in immunodeficiency 26. Orthologous to human PRKDC (protein kinase, DNA-activated, catalytic subunit). [provided by Alliance of Genome Resources, Apr 2022]

Prkdc Products(1)

mRNA Protein Name
NM_011159.2 NP_035289.2 DNA-dependent protein kinase catalytic subunit

Prkdc Protein Structure

NUC194

NUC194: pfam08163 (1812 - 2197)

DNAPKcs_CC5

DNAPKcs_CC5: pfam19704 (2208 - 2890)

FAT

FAT: pfam02259 (3023 - 3469)

TEL1

TEL1: cl34875 (3439 - 4012)

PIKKc_DNA-PK

PIKKc_DNA-PK: cd05172 (3718 - 4013)

FATC

FATC: pfam02260 (4096 - 4127)

  • 0
  • 700
  • 1400
  • 2100
  • 2800
  • 3500
  • 4128 a.a.
Protein Preferred Names Protein Names

DNA-dependent protein kinase catalytic subunit

DNA-PK catalytic subunit

doxorubicin nephropathy

severe combined immunodeficiency

Orthologs Information

Species Symbol Source ID
Homo sapiens Prkdc NCBI NCBI:5591