Apc - APC regulator of WNT signaling pathway Gene
Also Known as RATAPC
生物種: Rattus norvegicus
About Apc
This gene has 3 transcripts (splice variants), 169 orthologues, 1 paralogue and is associated with 90 phenotypes. Biased expression in Brain (RPKM 51.2), Lung (RPKM 138.6) and 9 other tissues.
Summary
Enables microtubule binding activity. Involved in several processes, including cellular response to nerve growth factor stimulus; negative regulation of cardiac muscle cell proliferation; and regulation of glutamate metabolic process. Located in several cellular components, including axonal growth cone; cell body fiber; and lateral plasma membrane. Part of protein-containing complex. Colocalizes with neuron projection and synapse. Used to study anemia; colon adenocarcinoma; colon cancer; and familial adenomatous polyposis. Human ortholog(s) of this gene implicated in several diseases, including carcinoma (multiple); endometrial Cancer (multiple); familial adenomatous polyposis 1; hereditary desmoid disease; and medulloblastoma. Orthologous to human APC (APC regulator of Wnt signaling pathway). [provided by Alliance of Genome Resources, Apr 2022]
Apc Products (1)
| mRNA | Protein | Name |
|---|---|---|
| NM_012499.1 | NP_036631.1 | adenomatous polyposis coli protein |
| Molecular Function GO Annotation | Evidence | 参考文献 | 由来 |
|---|---|---|---|
| enables microtubule binding |
IDA
IDA: Inferred from direct assay
|
12610628 | RGD |
| enables microtubule binding |
IMP
IMP: Inferred from mutant phenotype
|
15670646 | RGD |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
9786987 | RGD |
| enables protein-containing complex binding |
IDA
IDA: Inferred from direct assay
|
19858196 | RGD |
| Biological Process GO Annotation | Evidence | 参考文献 | 由来 |
|---|---|---|---|
| involved in cellular response to nerve growth factor stimulus |
IEP
IEP: Inferred from expression pattern
|
22399805 | RGD |
| involved in establishment or maintenance of cell polarity |
IDA
IDA: Inferred from direct assay
|
12610628 | RGD |
| involved in negative regulation of cardiac muscle cell proliferation |
IMP
IMP: Inferred from mutant phenotype
|
28948298 | RGD |
| involved in neuron projection development |
IMP
IMP: Inferred from mutant phenotype
|
16303851 | RGD |
| involved in pancreas development |
IEP
IEP: Inferred from expression pattern
|
16688812 | RGD |
| involved in regulation of glutamate metabolic process |
IDA
IDA: Inferred from direct assay
|
19858196 | RGD |
| involved in response to alcohol |
IEP
IEP: Inferred from expression pattern
|
18945221 | RGD |
| involved in response to xenobiotic stimulus |
IEP
IEP: Inferred from expression pattern
|
11689703 | RGD |
| Cellular Component GO Annotation | Evidence | 参考文献 | 由来 |
|---|---|---|---|
| located in axonal growth cone |
IDA
IDA: Inferred from direct assay
|
15670646 | RGD |
| located in cell body fiber |
IDA
IDA: Inferred from direct assay
|
23001297 | RGD |
| located in cell cortex |
IDA
IDA: Inferred from direct assay
|
18042042 | RGD |
| located in dendrite |
IDA
IDA: Inferred from direct assay
|
15670646 | RGD |
| located in growth cone |
IDA
IDA: Inferred from direct assay
|
16303851 | RGD |
| located in lamellipodium |
IDA
IDA: Inferred from direct assay
|
15670646 | RGD |
| located in lateral plasma membrane |
IDA
IDA: Inferred from direct assay
|
8638125 | RGD |
| located in microtubule |
IDA
IDA: Inferred from direct assay
|
16767746 | RGD |
| located in neuron projection terminus |
IDA
IDA: Inferred from direct assay
|
18042042 | RGD |
| located in neuronal cell body |
IDA
IDA: Inferred from direct assay
|
8638125 | RGD |
| located in nuclear membrane |
IDA
IDA: Inferred from direct assay
|
18042042 | RGD |
| part of protein-containing complex |
IDA
IDA: Inferred from direct assay
|
19858196 | RGD |
| located in synaptic vesicle membrane |
IDA
IDA: Inferred from direct assay
|
8638125 | RGD |
Apc Protein Structure
Suppressor_APC: pfam11414 (134 - 214)
ARM: smart00185 (347 - 399)
APC_rep: pfam18797 (400 - 473)
ARM: sd00043 (497 - 533)
ARM: smart00185 (537 - 578)
ARM: sd00043 (541 - 578)
ARM: sd00043 (588 - 620)
ARM: sd00043 (628 - 669)
ARM: smart00185 (674 - 714)
ARM: sd00043 (678 - 712)
Arm: pfam00514 (716 - 756)
ARM: sd00043 (720 - 756)
Arm_APC_u3: pfam16629 (757 - 1044)
APC_u5: pfam16630 (1061 - 1160)
APC_r: pfam05923 (1281 - 1298)
APC_u9: pfam16633 (1307 - 1392)
APC_r: pfam05923 (1662 - 1685)
APC_u13: pfam16634 (1687 - 1739)
SAMP: pfam05924 (1741 - 1762)
APC_u14: pfam16635 (1771 - 1864)
APC_u15: pfam16636 (1898 - 1972)
SAMP: pfam05924 (2059 - 2078)
APC_basic: pfam05956 (2250 - 2595)
EB1_binding: pfam05937 (2697 - 2869)
- 0
- 500
- 1000
- 1500
- 2000
- 2500
- 2870 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
adenomatous polyposis coli protein |
|
|