PIN1 degrader-2
PIN1 degrader-2 is a covalent PIN1 degrader with an IC50 of 4.1 nM. PIN1 degrader-2 induces a decrease in the thermal stability of PIN1 and triggers concentration-dependent PIN1 degradation in various cancer cells. PIN1 degrader-2 covalently modifies PIN1 Cys113. PIN1 degrader-2 also reduces the cell viability of pancreatic cancer, breast cancer, prostate cancer and lung cancer cells. PIN1 degrader-2 can be used in research related to pancreatic cancer, breast cancer, prostate cancer and non-small cell lung cancer.
For research use only. We do not sell to patients.
- CAS No.: 3080918-74-4
- Formula: C31H32ClFN6O4
- Molecular Weight:607.07
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Storage:
Please store the product under the recommended conditions in the Certificate of Analysis.
Biological Activity
Description
IC50 & Target
[1]|
Pin1 4.1 nM (IC50) |
Cellular Effect
|
Cell Line
|
Type | Value | Description | References |
|---|---|---|---|---|
| BXPC-3 | EC50 |
16.6 μM
|
Reduced BxPC3 cells viability.
Reduced BxPC3 cells viability.
|
39531501 |
| MIA PaCa-2 | EC50 |
7.4 μM
|
Reduced MIA PaCa-2 cells viability.
Reduced MIA PaCa-2 cells viability.
|
39531501 |
| PANC-1 | EC50 |
5.8 μM
|
Reduced PANC-1 cells viability.
Reduced PANC-1 cells viability.
|
39531501 |
| MDA-MB-231 | EC50 |
23 μM
|
Reduced MDA-MB-231 cells viability.
Reduced MDA-MB-231 cells viability.
|
39531501 |
| PC-3 | EC50 |
22.2 μM
|
Reduced PC3 cells viability.
Reduced PC3 cells viability.
|
39531501 |
| A549 | EC50 |
~30 μM
|
Reduced A549 NucLight Red cells viability.
Reduced A549 NucLight Red cells viability.
|
39531501 |
In Vitro
PIN1 degrader-2 (164A10) (pre-incubated for 6 hours; followed by an additional 2-hour incubation) potently binds to purified human Pin1 in the DELFIA assay, with an IC50 value of 4.1 nM[1].
PIN1 degrader-2 (40 μM; PIN1 20 μM; 10 min; 10 °C) induces a decrease in the thermal stability of PIN1, with a ΔTm of -8.95 °C[1].
PIN1 degrader-2 (5 or 15 μM; 24 h) significantly reduces PIN1 protein levels in BxPC3 cells, with normalized PIN1/actin ratios of approximately 11% and 2%, respectively[2].
PIN1 degrader-2 (0.5-15 μM; 24 h) reduces PIN1 protein levels in a concentration-dependent manner in BxPC3, MIA PaCa-2, PANC-1, MDA-MB-231, PC3 and A549 NucLight Red cells; the normalized PIN1/actin ratios are approximately 8%, 9%, 5%, 15%, 22% and 24% at 15 μM[1].
PIN1 degrader-2 (5 μM; 24 h) induces PIN1 degradation in BxPC3 cells; the proteasome inhibitors BTZ (50 nM) and CFZ (1 μM) significantly rescue this degradation, whereas the autophagy inhibitors Baf A1 (100 nM) and HCQ (25 μM) exert no such effective rescuing effect[1].
The crystal structure of PIN1 degrader-2 in complex with PIN1 R14A reveals continuous electron density between 164A10 and PIN1 Cys113, confirming the covalent modification of Cys113 by PIN1 degrader-2 (PDB ID: 8VJG)[1].
PIN1 degrader-2 (72 h) reduces the cell viability of BxPC3, MIA PaCa-2, PANC-1, MDA-MB-231, PC3, A549 and KPC cells, with EC50 values of 16.6, 7.4, 5.8, 23.0, 22.2, approximately 30 and >20 μM[1], respectively.
MedChemExpress (MCE) has not independently confirmed the accuracy of these methods. They are for reference only. Further protocols information, click here.
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Cell Line:human pancreatic cancer BxPC3 cells
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Concentration:5 μM; 0.5-15 μM
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Incubation Time:24 h
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Result:Reduced Pin1 protein levels to 18% of DMSO control levels at 5 μM for 24 hours.
Showed dose-dependent Pin1 degradation at concentrations ranging from 0.5 to 15 μM for 24 hours.
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Cell Line:human pancreatic cancer MIA PaCa-2 cells
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Concentration:0.5-15 μM
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Incubation Time:24 h
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Result:Reduced Pin1 protein levels to 17% of DMSO control levels at 5 μM for 24 hours, with near-complete degradation at 15 μM.
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Cell Line:human pancreatic cancer PANC-1 cells
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Concentration:0.5-15 μM
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Incubation Time:24 h
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Result:Reduced Pin1 protein levels to 9% of DMSO control levels at 5 μM for 24 hours, with near-complete degradation at 15 μM.
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Cell Line:human breast cancer MDA-MB-231 cells
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Concentration:0.5-15 μM
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Incubation Time:24 h
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Result:Showed dose-dependent Pin1 degradation, with a DC50 of ~500 nM.
Reduced Pin1 protein levels to 28% of DMSO control levels at 5 μM for 24 hours, with near-complete degradation at 15 μM.
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Cell Line:human prostate cancer PC3 cells
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Concentration:0.5-15 μM
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Incubation Time:24 h
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Result:Reduced Pin1 protein levels to 53% of DMSO control levels at 5 μM for 24 hours, with substantial degradation at 15 μM.
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Cell Line:human non-small cell lung cancer A549 NucLight Red cells
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Concentration:0.5-15 μM
-
Incubation Time:24 h
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Result:Reduced Pin1 protein levels to 49% of DMSO control levels at 5 μM for 24 hours, with substantial degradation at 15 μM.
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Cell Line:human pancreatic cancer BxPC3 cells
-
Concentration:5 μM
-
Incubation Time:24 h
-
Result:BTZ and CFZ markedly rescued PIN1 degradation, whereas Baf A1 and HCQ were ineffective.
Chemical Information
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CAS No. 3080918-74-4
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Molecular Weight 607.07
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Formula C31H32ClFN6O4
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SMILES
NC([C@H](CC1=CNC2=C1C=C(F)C=C2)NC([C@@H]3CCCCN3C([C@@H]4CC5=C(CN4C(CCl)=O)NC6=C5C=CC=C6)=O)=O)=O
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Shipping
Room temperature in continental US; may vary elsewhere.
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Storage
Please store the product under the recommended conditions in the Certificate of Analysis.
Protocols
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Cell Cytotoxicity Assay
Cytotoxicity assays are usually based on the assessment of cell membrane damage, which can also be indirectly detected by measuring cell viability. Detection methods include MTT assay, CKK-8 assay, LDH assay and ATP assay, etc.
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Mammalian live/dead viability and cytotoxicity staining
Live/dead viability and cytotoxicity staining assays are based on the simultaneous detection of intracellular esterase activity in metabolically active (viable) cells and membrane integrity loss in non-viable cells. In commonly used dual-staining approaches, membrane-permeant fluorogenic substrates are converted by intracellular esterases into fluorescent products in live cells, while impermeant DNA-binding dyes selectively enter cells with compromised plasma membranes and label nucleic acids in dead or dying cells, enabling discrimination between viable and non-viable populations by fluorescence microscopy or flow cytometry.
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CCK-8/WST-8 Cell Proliferation Assay
The CCK-8/WST-8 assay is based on the reduction of the water-soluble tetrazolium salt WST-8 to a water-soluble formazan product by cellular dehydrogenases in metabolically active cells, where the generated formazan amount is proportional to the number of living cells and is quantified by measuring absorbance in the visible range, providing a colorimetric readout for cell viability and proliferation assessment. This class of tetrazolium-based assays improves upon earlier MTT-based systems by producing a water-soluble formazan, eliminating the need for organic solubilization steps and enabling direct spectrophotometric measurement in culture medium.
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MTT Cell Proliferation Assay
The MTT assay is a colorimetric endpoint assay for estimating viable cell number, cell growth, cytotoxicity, or cell activation in cultured mammalian cells. Living cells reduce the yellow tetrazolium salt MTT into purple/blue formazan, while dead cells do not generate the same signal; the resulting color can be quantified with a multiwell spectrophotometer. MTT reduction is commonly interpreted as a readout of metabolic activity that often correlates with viable cell number, but it should not be treated as a direct cell-counting method unless the assay is optimized for the cell type and experimental condition. Studies show that MTT reduction can involve mitochondrial and non-mitochondrial reducing systems, and formazan may accumulate in intracellular lipid droplets rather than simply marking mitochondria.
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Breast Cancer Modeling
Breast cancer is a heterogeneous cancer, and it has been distinguished into four subtypes: luminal A, luminal B, HER2-positive and basal-like. Molecular mutations, epigenetic alterations, hormone exposure and immune microenvironment are related to the progression of breast cancer.
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Cell Viability Determination by MTT Colorimetric Assay
The following protocol uses the MTT colorimetric assay as a classic literature-established method for assessing cell viability/metabolic activity in cultured mammalian cells. MTT[3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide] is reduced by metabolically active cells to a colored formazan product; the amount of formazan is quantified spectrophotometrically and provides an indirect measure of metabolically active viable cells. Importantly, MTT reduction reflects cellular oxidoreductase/metabolic activity rather than an absolute direct count of living cells, so changes in cellular metabolism can alter the signal independently of cell number.
Purity & Documentation
References
Calculators
Concentration (start) × Volume (start) = Concentration (final) × Volume (final)