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FGD5 - FYVE, RhoGEF and PH domain containing 5 Gene

Also Known as ZFYVE23

Species: Homo sapiens

Gene Type: protein coding

Gene ID: 152273

About FGD5

Cytogenetic location: 3p25.1 Genomic coordinates (GRCh38): 3:14,810,688-14,934,571 (from NCBI)

This gene has 7 transcripts (splice variants), 270 orthologues and 10 paralogues. Broad expression in spleen (RPKM 15.9), lung (RPKM 13.8) and 22 other tissues.

Summary

Predicted to enable guanyl-nucleotide exchange factor activity and small GTPase binding activity. Predicted to be involved in several processes, including filopodium assembly; regulation of GTPase activity; and regulation of cell shape. Located in plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]

FGD5 Products (2)

mRNA	Protein	Name
NM_001320276.2	NP_001307205.1	FYVE, RhoGEF and PH domain-containing protein 5 isoform 2
NM_152536.4	NP_689749.3	FYVE, RhoGEF and PH domain-containing protein 5 isoform 1

Gene Ontology

Molecular Function

Molecular Function GO Annotation	Evidence	References	Source
enables protein binding	IPI IPI: Inferred from physical interaction	23455924	GOA

EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

FGD5 Protein Structure

RhoGEF

FYVE

0
300
600
900
1200
1462 a.a.

Protein Preferred Names	Protein Names
FYVE, RhoGEF and PH domain-containing protein 5	zinc finger FYVE domain-containing protein 23

FGD5 Protein-protein interaction Information

Type	Protein Name	Protein ID	Interactor	Interactor Species	Interactor ID	Detection Method	References
Intra	FGD5	Q6ZNL6	SUV39H1	Homo sapiens	O43463	Y2H	23455924
Intra	FGD5	Q6ZNL6	SUV39H1	Homo sapiens	O43463	Anti Tag CoIP	23455924
Intra	FGD5	Q6ZNL6	COQ8A	Homo sapiens	Q8NI60	Y2H Array	32814053
Intra	FGD5	Q6ZNL6	COQ8A	Homo sapiens	Q8NI60	Y2H Pooling	32814053
Intra	FGD5	Q6ZNL6	COQ8A	Homo sapiens	Q8NI60	Validated Y2H	32814053

Cross: Cross-species interaction Intra: Intraspecies interaction

Related Diseases

Diseases	Alias
Aarskog-Scott Syndrome	Aarskog Syndrome Faciogenital Dysplasia Faciodigitogenital Syndrome AAS Fgdy X-Linked Aarskog Syndrome Intellectual Developmental Disorder, X-Linked, Syndromic 16 Aarskog Syndrome, X-Linked Intellectual Developmental Disorder, X-Linked Syndromic 16 Greig'S Syndrome Aarskog Scott Syndrome Aarskog Disease Scott Aarskog Syndrome Facio-Digito-Genital Dysplasia Faciogenital Dysplasia With Attention Deficit-Hyperactivity Disorder Aarskog-Scott Syndrome ) Syndrome
Gastroduodenitis
Breast Abscess	Abscess Of Breast

Diseases	Alias
Waldenstroem'S Macroglobulinemia	Waldenstroem'S Macroglobulinemia Waldenstroem'S Macroglobulinemia Macroglobulinemia Of Waldenstrom Lymphoplasmacytic Lymphoma With Igm Gammopathy Lymphoplasmacytic Lymphoma Waldenstroem'S Macroglobulinemia Waldenstroem'S Macroglobulinemia Macroglobulinemia Of Waldenstrom Lymphoplasmacytic Lymphoma With Igm Gammopathy Lymphoplasmacytic Lymphoma

Related Agents

Pre-clinical Phase

Pre-clinical Phase

Bioactive Molecules (1)

Cat. No.	Product Name	Effect	Purity	Rare Diseases
HY-RS04884	FGD5 Human Pre-designed siRNA Set A	Pre-designed Set	/	Unkown

Orthologs Information

Species	Symbol	Source	ID
Mus musculus	FGD5	MGD	MGI:2443369
Canis familiaris	FGD5	VGNC	VGNC:40837
Rattus norvegicus	FGD5	RGD	RGD:1305589
Macaca mulatta	FGD5	VGNC	VGNC:72533
Bos taurus	FGD5	VGNC	VGNC:28968
Felis catus	FGD5	VGNC	VGNC:62243
Others	FGD5	NCBI