COL23A1 - collagen type XXIII alpha 1 chain Gene

Species: Homo sapiens

Gene Type: protein coding
Gene ID: 91522

About COL23A1

Cytogenetic location: 5q35.3 Genomic coordinates (GRCh38): 5:178,237,618-178,590,393 (from NCBI)

This gene has 9 transcripts (splice variants), 132 orthologues and 37 paralogues. Biased expression in thyroid (RPKM 9.3), heart (RPKM 2.2) and 10 other tissues.

Summary

COL23A1 is a member of the transmembrane collagens, a subfamily of the nonfibrillar collagens that contain a single pass hydrophobic transmembrane domain (Banyard et al., 2003 [PubMed 12644459]).[supplied by OMIM, Mar 2008]

COL23A1 Products (1)

mRNA Protein Name
NM_173465.4 NP_775736.2 collagen alpha-1(XXIII) chain

Gene Ontology

  • Molecular Function
Molecular Function GO Annotation Evidence References Source
enables protein binding IPI
IPI: Inferred from physical interaction
25416956 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

COL23A1 Protein Structure

Collagen

Collagen: Collagen triple helix repeat (20 copies) (120 - 172)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (160 - 218)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (199 - 256)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (251 - 305)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (321 - 375)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (342 - 396)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (412 - 470)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (463 - 520)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 500
  • 540 a.a.
Protein Preferred Names Protein Names

collagen alpha-1(XXIII) chain

  • collagen, type XXIII, alpha 1

COL23A1 Protein-protein interaction Information

Type
Protein Name Protein ID Interactor Interactor Species Interactor ID Detection Method References
Intra
COL23A1 Q86Y22 EXOSC8 Homo sapiens Q96B26
Validated Y2H
25416956
Cross: Cross-species interaction Intra: Intraspecies interaction

Related Diseases

Diseases Alias
Paraurethral Gland Cancer

  • Malignant Tumor Of Paraurethral Gland

  • Malignant Tumor Of The Paraurethral Gland

  • Skene Gland Carcinoma

  • Carcinoma Of The Paraurethral Gland

  • Paraurethral Gland Carcinoma
Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Related Agents

  • Pre-clinical Phase

Pre-clinical Phase

Bioactive Molecules (1)
Cat. No. Product Name
Effect
Purity
Rare Diseases
HY-RS02975 COL23A1 Human Pre-designed siRNA Set A Pre-designed Set / Unkown

Orthologs Information

Species Symbol Source ID
Mus musculus COL23A1 MGD MGI:2653243
Rattus norvegicus COL23A1 RGD RGD:727898
Bos taurus COL23A1 VGNC VGNC:54416
Felis catus COL23A1 VGNC VGNC:102181
Canis familiaris COL23A1 VGNC VGNC:51705
Others COL23A1 NCBI