H2BC12 - H2B clustered histone 12 Gene
Also Known as H2BK; H2B/S; H2BFT; H2BFAiii; HIST1H2BK
生物種: Homo sapiens
About H2BC12
This gene has 1 transcript (splice variant), 164 orthologues and 21 paralogues. Ubiquitous expression in prostate (RPKM 42.3), testis (RPKM 29.8) and 25 other tissues.
Summary
Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene encodes a replication-dependent histone that is a member of the histone H2B family. The protein encoded is an antimicrobial protein with Antibacterial and Antifungal activity. Two transcripts that encode the same protein have been identified for this gene, which is found in the histone microcluster on chromosome 6p21.33. [provided by RefSeq, Aug 2015]
H2BC12 Products (2)
| mRNA | Protein | Name |
|---|---|---|
| NM_001312653.2 | NP_001299582.1 | histone H2B type 1-K |
| NM_080593.2 | NP_542160.1 | histone H2B type 1-K |
| Molecular Function GO Annotation | Evidence | 参考文献 | 由来 |
|---|---|---|---|
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
31759698 | GOA |
| Biological Process GO Annotation | Evidence | 参考文献 | 由来 |
|---|---|---|---|
| involved in antibacterial humoral response |
IDA
IDA: Inferred from direct assay
|
12860195 | GOA |
| involved in antimicrobial humoral immune response mediated by antimicrobial peptide |
IDA
IDA: Inferred from direct assay
|
12860195 | GOA |
| involved in defense response to Gram-negative bacterium |
IDA
IDA: Inferred from direct assay
|
15019208 | GOA |
| involved in defense response to Gram-positive bacterium |
IDA
IDA: Inferred from direct assay
|
12860195 | GOA |
| involved in innate immune response in mucosa |
IDA
IDA: Inferred from direct assay
|
12860195 | GOA |
| involved in killing of cells of another organism |
IDA
IDA: Inferred from direct assay
|
15019208 | GOA |
| Cellular Component GO Annotation | Evidence | 参考文献 | 由来 |
|---|---|---|---|
| located in extracellular space |
IDA
IDA: Inferred from direct assay
|
12860195 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
16319397 | GOA |
H2BC12 Protein Structure
Histone: Core histone H2A/H2B/H3/H4 (32 - 101)
- 0
- 100
- 126 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
histone H2B type 1-K |
|
H2BC12 Protein-protein interaction Information
|
Type
|
タンパク質名 | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | 参考文献 |
|---|---|---|---|---|---|---|---|
|
Cross
|
H2BC12 | O60814 | LANA1 | Human herpesvirus 8 | Q9QR71 | 31759698 | |
|
Intra
|
H2BC12 | O60814 | SMARCB1 | Homo sapiens | Q12824 | 31759698 | |
|
Intra
|
H2BC12 | O60814 | SMARCB1 | Homo sapiens | Q12824 | 31759698 |
Orthologs Information
| 生物種 | Symbol | 由来 | ID |
|---|---|---|---|
| Mus musculus | H2BC12 | MGD | MGI:2448399 |
| Macaca mulatta | H2BC12 | VGNC | VGNC:109709 |
| Rattus norvegicus | H2BC12 | RGD | RGD:1593016 |
| Others | H2BC12 | NCBI |