DDX46 - DEAD-box helicase 46 Gene
Also Known as Prp5; PRPF5
生物種: Homo sapiens
About DDX46
This gene has 12 transcripts (splice variants), 203 orthologues and 38 paralogues. Ubiquitous expression in appendix (RPKM 11.5), lymph node (RPKM 11.4) and 25 other tissues.
Summary
This gene encodes a member of the DEAD box protein family. DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure, such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. The protein encoded by this gene is a component of the 17S U2 snRNP complex; it plays an important role in pre-mRNA splicing. Multiple alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Jul 2014]
DDX46 Products (2)
| mRNA | Protein | Name |
|---|---|---|
| NM_001300860.2 | NP_001287789.1 | probable ATP-dependent RNA helicase DDX46 isoform 1 |
| NM_014829.4 | NP_055644.2 | probable ATP-dependent RNA helicase DDX46 isoform 2 |
| Molecular Function GO Annotation | Evidence | 参考文献 | 由来 |
|---|---|---|---|
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
22365833 | GOA |
| Biological Process GO Annotation | Evidence | 参考文献 | 由来 |
|---|---|---|---|
| involved in U2-type prespliceosome assembly |
IDA
IDA: Inferred from direct assay
|
36797247 | GOA |
| involved in mRNA splicing, via spliceosome |
IDA
IDA: Inferred from direct assay
|
32494006 | GOA |
| Cellular Component GO Annotation | Evidence | 参考文献 | 由来 |
|---|---|---|---|
| part of U2-type spliceosomal complex |
IDA
IDA: Inferred from direct assay
|
32494006 | GOA |
DDX46 Protein Structure
DEAD: DEAD/DEAH box helicase (396 - 568)
Helicase_C: Helicase conserved C-terminal domain (639 - 714)
- 0
- 200
- 400
- 600
- 800
- 1031 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
probable ATP-dependent RNA helicase DDX46 |
|
Orthologs Information
| 生物種 | Symbol | 由来 | ID |
|---|---|---|---|
| Canis familiaris | DDX46 | VGNC | VGNC:39859 |
| Mus musculus | DDX46 | MGD | MGI:1920895 |
| Felis catus | DDX46 | VGNC | VGNC:102184 |
| Macaca mulatta | DDX46 | VGNC | VGNC:71663 |
| Bos taurus | DDX46 | VGNC | VGNC:27969 |
| Rattus norvegicus | DDX46 | RGD | RGD:708480 |
| Others | DDX46 | NCBI |