PABPC4 - poly(A) binding protein cytoplasmic 4 Gene
Also Known as APP1; APP-1; PABP4; iPABP
Species: Homo sapiens
About PABPC4
This gene has 42 transcripts (splice variants), 219 orthologues and 24 paralogues. Ubiquitous expression in testis (RPKM 55.5), ovary (RPKM 46.1) and 25 other tissues.
Summary
Poly(A)-binding proteins (PABPs) bind to the poly(A) tail present at the 3-prime ends of most eukaryotic mRNAs. PABPC4 or IPABP (inducible PABP) was isolated as an activation-induced T-cell mRNA encoding a protein. Activation of T cells increased PABPC4 mRNA levels in T cells approximately 5-fold. PABPC4 contains 4 RNA-binding domains and proline-rich C terminus. PABPC4 is localized primarily to the cytoplasm. It is suggested that PABPC4 might be necessary for regulation of stability of labile mRNA species in activated T cells. PABPC4 was also identified as an antigen, APP1 (activated-platelet protein-1), expressed on thrombin-activated rabbit platelets. PABPC4 may also be involved in the regulation of protein translation in platelets and megakaryocytes or may participate in the binding or stabilization of polyadenylates in platelet dense granules. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. This protein has also been found to interact with coronavirus nucleocapsid proteins and is thought to inhibit coronavirus replication. [provided by RefSeq, Nov 2021]
PABPC4 Products (3)
| mRNA | Protein | Name |
|---|---|---|
| NM_001135653.2 | NP_001129125.1 | polyadenylate-binding protein 4 isoform 1 |
| NM_001135654.2 | NP_001129126.1 | polyadenylate-binding protein 4 isoform 3 |
| NM_003819.4 | NP_003810.1 | polyadenylate-binding protein 4 isoform 2 |
| Molecular Function GO Annotation | Evidence | Références | Source |
|---|---|---|---|
| enables poly(A) binding |
IDA
IDA: Inferred from direct assay
|
8524242 | GOA |
| NOT enables poly(C) RNA binding |
IDA
IDA: Inferred from direct assay
|
8524242 | GOA |
| enables poly(U) RNA binding |
IDA
IDA: Inferred from direct assay
|
8524242 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
11369516 | GOA |
| Cellular Component GO Annotation | Evidence | Références | Source |
|---|---|---|---|
| located in cytoplasm |
IDA
IDA: Inferred from direct assay
|
8524242 | GOA |
| located in cytoplasmic stress granule |
IDA
IDA: Inferred from direct assay
|
21940797 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
21940797 | GOA |
| part of ribonucleoprotein complex |
IDA
IDA: Inferred from direct assay
|
17289661 | GOA |
PABPC4 Protein Structure
RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (13 - 83)
RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (101 - 168)
RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (193 - 261)
RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (296 - 363)
PABP: Poly-adenylate binding protein, unique domain (552 - 623)
- 0
- 100
- 200
- 300
- 400
- 500
- 600
- 644 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
polyadenylate-binding protein 4 |
|
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Deafness, Autosomal Dominant 5 |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Bos taurus | PABPC4 | VGNC | VGNC:55644 |
| Macaca mulatta | PABPC4 | VGNC | VGNC:100023 |
| Rattus norvegicus | PABPC4 | RGD | RGD:1305015 |
| Mus musculus | PABPC4 | MGD | MGI:2385206 |
| Others | PABPC4 | NCBI |