PTPRT - protein tyrosine phosphatase receptor type T Gene
Also Known as R-PTP-T; RPTPrho; RPTP-rho
Species: Homo sapiens
About PTPRT
This gene has 12 transcripts (splice variants), 221 orthologues, 35 paralogues and is associated with 128 phenotypes. Biased expression in brain (RPKM 9.9) and placenta (RPKM 1.1).
Summary
The protein encoded by this gene is a member of the protein tyrosine Phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic transformation. This PTP possesses an extracellular region, a single transmembrane region, and two tandem intracellular catalytic domains, and thus represents a receptor-type PTP. The extracellular region contains a meprin-A5 antigen-PTP (MAM) domain, Ig-like and fibronectin type III-like repeats. The protein domain structure and the expression pattern of the mouse counterpart of this PTP suggest its roles in both signal transduction and cellular adhesion in the central nervous system. Two alternatively spliced transcript variants of this gene, which encode distinct proteins, have been reported. [provided by RefSeq, Jul 2008]
PTPRT Products (5)
| mRNA | Protein | Name |
|---|---|---|
| NM_001394024.1 | NP_001380953.1 | receptor-type tyrosine-protein phosphatase T isoform 3 precursor |
| NM_001394025.1 | NP_001380954.1 | receptor-type tyrosine-protein phosphatase T isoform 4 precursor |
| NM_001394026.1 | NP_001380955.1 | receptor-type tyrosine-protein phosphatase T isoform 5 precursor |
| NM_007050.6 | NP_008981.4 | receptor-type tyrosine-protein phosphatase T isoform 2 precursor |
| NM_133170.4 | NP_573400.3 | receptor-type tyrosine-protein phosphatase T isoform 1 precursor |
| Molecular Function GO Annotation | Evidence | Verweise | Source |
|---|---|---|---|
| enables STAT family protein binding |
IPI
IPI: Inferred from physical interaction
|
17360477 | GOA |
| enables alpha-catenin binding |
IDA
IDA: Inferred from direct assay
|
16973135 | GOA |
| enables beta-catenin binding |
IPI
IPI: Inferred from physical interaction
|
16973135 | GOA |
| enables cadherin binding |
IPI
IPI: Inferred from physical interaction
|
16973135 | GOA |
| enables delta-catenin binding |
IPI
IPI: Inferred from physical interaction
|
16973135 | GOA |
| enables gamma-catenin binding |
IDA
IDA: Inferred from direct assay
|
16973135 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
16273344 | GOA |
| enables protein homodimerization activity |
IPI
IPI: Inferred from physical interaction
|
24846175 | GOA |
| enables protein phosphatase binding |
IPI
IPI: Inferred from physical interaction
|
24846175 | GOA |
| enables protein tyrosine phosphatase activity |
IMP
IMP: Inferred from mutant phenotype
|
16973135 | GOA |
| enables transmembrane receptor protein tyrosine phosphatase activity |
IDA
IDA: Inferred from direct assay
|
24846175 | GOA |
| Cellular Component GO Annotation | Evidence | Verweise | Source |
|---|---|---|---|
| located in cell surface |
IDA
IDA: Inferred from direct assay
|
18644975 | GOA |
| located in plasma membrane |
IDA
IDA: Inferred from direct assay
|
18644975 | GOA |
PTPRT Protein Structure
MAM: MAM domain, meprin/A5/mu (32 - 191)
fn3: Fibronectin type III domain (296 - 372)
fn3: Fibronectin type III domain (501 - 577)
Y_phosphatase: Protein-tyrosine phosphatase (931 - 1161)
Y_phosphatase: Protein-tyrosine phosphatase (1221 - 1455)
- 0
- 300
- 600
- 900
- 1200
- 1460 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
receptor-type tyrosine-protein phosphatase T |
|
PTPRT Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | Verweise |
|---|---|---|---|---|---|---|---|
|
Cross
|
PTPRT | O14522 | Nrxn1 | Mus musculus | Q9CS84 | 19816407 | |
|
Cross
|
PTPRT | O14522 | Nrxn1 | Mus musculus | Q9CS84 | 19816407 | |
|
Intra
|
PTPRT | O14522 | PTPRN | Homo sapiens | Q16849 | 16273344 | |
|
Cross
|
PTPRT | O14522 | Nrxn3 | Mus musculus | Q6P9K9 | 19816407 | |
|
Cross
|
PTPRT | O14522 | Nlgn1 | Mus musculus | Q99K10 | 19816407 |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Autism |
|
|
| Schizophrenia |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Mus musculus | PTPRT | MGD | MGI:1321152 |
| Macaca mulatta | PTPRT | VGNC | VGNC:76623 |
| Bos taurus | PTPRT | VGNC | VGNC:57018 |
| Felis catus | PTPRT | VGNC | VGNC:69182 |
| Rattus norvegicus | PTPRT | RGD | RGD:1309653 |
| Canis familiaris | PTPRT | VGNC | VGNC:45199 |
| Others | PTPRT | NCBI |