HNRNPL - heterogeneous nuclear ribonucleoprotein L Gene
Also Known as HNRPL; hnRNP-L; P/OKcl.14
Species: Homo sapiens
About HNRNPL
This gene has 15 transcripts (splice variants), 1 gene allele, 295 orthologues and 5 paralogues. Ubiquitous expression in bone marrow (RPKM 99.2), lymph node (RPKM 60.1) and 25 other tissues.
Summary
Heterogeneous nuclear RNAs (hnRNAs) which include mRNA precursors and mature mRNAs are associated with specific proteins to form heterogenous ribonucleoprotein (hnRNP) complexes. Heterogeneous nuclear ribonucleoprotein L is among the proteins that are stably associated with hnRNP complexes and along with Other hnRNP proteins is likely to play a major role in the formation, packaging, processing, and function of mRNA. Heterogeneous nuclear ribonucleoprotein L is present in the nucleoplasm as part of the HNRP complex. HNRP proteins have also been identified outside of the nucleoplasm. Exchange of hnRNP for mRNA-binding proteins accompanies transport of mRNA from the nucleus to the cytoplasm. Since HNRP proteins have been shown to shuttle between the nucleus and the cytoplasm, it is possible that they also have cytoplasmic functions. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
HNRNPL Products (3)
| mRNA | Protein | Name |
|---|---|---|
| NM_001005335.2 | NP_001005335.1 | heterogeneous nuclear ribonucleoprotein L isoform b |
| NM_001385651.1 | NP_001372580.1 | heterogeneous nuclear ribonucleoprotein L isoform c |
| NM_001533.3 | NP_001524.2 | heterogeneous nuclear ribonucleoprotein L isoform a |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables pre-mRNA intronic binding |
IDA
IDA: Inferred from direct assay
|
25623890 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
11809897 | GOA |
| enables transcription cis-regulatory region binding |
IDA
IDA: Inferred from direct assay
|
11809897 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in negative regulation of DNA-templated transcription |
IMP
IMP: Inferred from mutant phenotype
|
33174841 | GOA |
| involved in regulation of alternative mRNA splicing, via spliceosome |
IMP
IMP: Inferred from mutant phenotype
|
25623890 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in chromatin |
IDA
IDA: Inferred from direct assay
|
33174841 | GOA |
| located in cytoplasm |
IDA
IDA: Inferred from direct assay
|
33174841 | GOA |
| located in nucleoplasm |
IDA
IDA: Inferred from direct assay
|
2687284 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
15798186 | GOA |
| part of ribonucleoprotein complex |
IDA
IDA: Inferred from direct assay
|
2687284 | GOA |
| located in ribonucleoprotein granule |
IDA
IDA: Inferred from direct assay
|
17289661 | GOA |
HNRNPL Protein Structure
RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (120 - 174)
RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (211 - 268)
RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (400 - 454)
- 0
- 100
- 200
- 300
- 400
- 500
- 589 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
heterogeneous nuclear ribonucleoprotein L |
|
HNRNPL Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
HNRNPL | P14866 | HNRNPA2B1 | Homo sapiens | P22626 | 35271311 | |
|
Intra
|
HNRNPL | P14866 | HNRNPA2B1 | Homo sapiens | P22626 | 23976881 | |
|
Intra
|
HNRNPL | P14866 | VHL | Homo sapiens | P40337 | 23976881 | |
|
Intra
|
HNRNPL | P14866 | HNRNPK | Homo sapiens | P61978 | 35271311 |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Alzheimer Disease 5 |
|
|
| Mouth Disease |
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Mus musculus | HNRNPL | MGD | MGI:104816 |
| Rattus norvegicus | HNRNPL | RGD | RGD:71059 |
| Macaca mulatta | HNRNPL | VGNC | VGNC:81187 |
| Bos taurus | HNRNPL | VGNC | VGNC:54437 |
| Felis catus | HNRNPL | VGNC | VGNC:67610 |
| Canis familiaris | HNRNPL | VGNC | VGNC:54847 |
| Others | HNRNPL | NCBI |